Gene Information

Name : ribD (MARHY0713)
Accession : YP_005428627.1
Strain : Marinobacter hydrocarbonoclasticus ATCC 49840
Genome accession: NC_017067
Putative virulence/resistance : Unknown
Product : diaminohydroxyphosphoribosylaminopyrimidine deaminase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.193
Position : 752477 - 753592 bp
Length : 1116 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; Product type e : enzyme

DNA sequence :
ATGATTTCAGACCGTGATCGGGCAATGATGGCCCGGGCCGTTCAACTGGCCTGGCGCGGTCGCTATTCCACCCATCCCAA
TCCCCGTGTTGGTTGTGTTATTGCCAAAGGCGATCTGATTGTGGGCGAGGGCTGGCACGAGCGTGCCGGTGAAGCCCATG
CGGAAGTGCGTGCTTTGAGCCAGGCAGGCCATGAGGCTCGGGGAGCCACCGCCTACGTTACGCTGGAGCCTTGCAGCCAT
TACGGGCGCACGCCGCCCTGCGCACGGGCACTGATAGATGCCGGTGTGGCCCATGTGTTTGCCGCTACCAAAGACCCCAA
CCCGTCTGTGTCCGGTCGGGGGCTGGATATGCTCAGGGAGGCTGGCATACGGGTGACCGAAGGCGTGATGGCCGATGAGG
CTTCGCGTCTGAATCCTGGCTTCATGAAGCGTATGAATACCGGCCGCCCCTGGGTTCGGCTGAAGATGGCGGCCAGTCTT
GATGGCCGGACCGCCATGGCCAGTGGTGAAAGCCAGTGGATAACCGGCCCGGAGGCGCGCGCGGATGTGCAGCGTTTGCG
GGCGATCAGCGACGCCATCCTCACCGGGGTAGGTACGGTACTGGCGGATGACCCTTCGTTGACCGTTCGGCGGGACGAGA
TGGGCGATATCGGCGATGCCACGGATCCGTCCCGGCAGCCGTTGCGGGTGATCGCCGACCGGGATGCCCGTACGCCGGCC
ACCGCCAGGATTCTTCAGGGTGGCAATGTGCAGGTATTCTGCGCCAGTTCGACACTGGCCTCCGGCCCGGCCCAGGATCT
GGCTGCGCTGGGCGTCAGCCTGACCGGGGTTGCCTGGAAAGATAACGGTGTTGATGTCGCCGAGTTGCTGGACGCGCTGG
GAGAGCTTGGTATTAACGAGTTGCTGGTTGAAGCCGGCCCTACGCTGGCCGGTACGTTCATCGGTGAAAATCTTGTGGAC
GAGCTCTGGCTCTACCAGGCCCCGGTTTTCCTGGGTAGTACCGGCAGGCCGACAGCGCATTTGCCGCTGGAGACCATGGC
CGACAAAGTGCAATGGAAGGTGCTGGATCGTCGTCAGGTGGGTGAGGATCAGCGTCTGATCCTGGCTCGCCACTAA

Protein sequence :
MISDRDRAMMARAVQLAWRGRYSTHPNPRVGCVIAKGDLIVGEGWHERAGEAHAEVRALSQAGHEARGATAYVTLEPCSH
YGRTPPCARALIDAGVAHVFAATKDPNPSVSGRGLDMLREAGIRVTEGVMADEASRLNPGFMKRMNTGRPWVRLKMAASL
DGRTAMASGESQWITGPEARADVQRLRAISDAILTGVGTVLADDPSLTVRRDEMGDIGDATDPSRQPLRVIADRDARTPA
TARILQGGNVQVFCASSTLASGPAQDLAALGVSLTGVAWKDNGVDVAELLDALGELGINELLVEAGPTLAGTFIGENLVD
ELWLYQAPVFLGSTGRPTAHLPLETMADKVQWKVLDRRQVGEDQRLILARH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 8e-68 51
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 8e-68 51