Gene Information

Name : algR (MARHY0398)
Accession : YP_005428322.1
Strain : Marinobacter hydrocarbonoclasticus ATCC 49840
Genome accession: NC_017067
Putative virulence/resistance : Virulence
Product : alginate biosynthesis regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 435422 - 436180 bp
Length : 759 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 2493441, 2544550; Product type r : regulator

DNA sequence :
ATGAATATCGAAGACAGCAAACGCGTACTGATTGCCGATGACGAACCTCTCGCCCGCCAGCGCATTCAGCGCCTGCTGGA
AGCCCTGCCGGATTACCGGGTTTGTGGCGAAGCGGTGGATGGCAACGACACCTTGCGCAAAGTGGCCGAACTGGAACCGG
ACATCCTGCTGCTGGACATCCGCATGCCCGGCATGGATGGCATGGAGGCAGCCGACCAGCTCAGCAAGCTCCAGAATCCG
CCCGCAGTGATTTTTTGCACCGCCTATGACCACTATGCCATCCAGGCGTTCGAGGTTCGCGCCGTCGCCTATCTGCTCAA
ACCGGTCCGGCGTGAGGCGCTGGCCGATGCCCTGGCCCGGGCCGGCAAGCTGAACCGGGTACAGAGGCAAGCCCTGGCGC
AAAGTACCGATGCCGGTAACGACCAACTGGCGGTGCGCACGCACCGAGGTACCGAACTGATCGACCTGGCAGATCTGTAC
TACTGTGAGGCCGACCAGAAGTACGTGACCCTGCACCACAGCCACGGCGAGACAGTGTGCGACTACACCCTGAAAGAACT
GGAGCAGGCTTACCCGGATCACCTTCTGCGCATCCACCGACACACACTGGTTGGCGTGCGCTTTATCCAGGGGCTGCGGC
GGTCGTCCGATGGCCAGAATCAGCTGGCACTGAAAGGCAATGCCACCCTGCTGCCGGTCAGCCGCCGCCATGCCAGTACG
GTCCGCCAATGGTTACACGAACACCAACCCTCCCCCTGA

Protein sequence :
MNIEDSKRVLIADDEPLARQRIQRLLEALPDYRVCGEAVDGNDTLRKVAELEPDILLLDIRMPGMDGMEAADQLSKLQNP
PAVIFCTAYDHYAIQAFEVRAVAYLLKPVRREALADALARAGKLNRVQRQALAQSTDAGNDQLAVRTHRGTELIDLADLY
YCEADQKYVTLHHSHGETVCDYTLKELEQAYPDHLLRIHRHTLVGVRFIQGLRRSSDGQNQLALKGNATLLPVSRRHAST
VRQWLHEHQPSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 3e-43 44
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 3e-43 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
algR YP_005428322.1 alginate biosynthesis regulator VFG0119 Protein 3e-48 48