Gene Information

Name : fepC (MARHY3141)
Accession : YP_005431021.1
Strain : Marinobacter hydrocarbonoclasticus ATCC 49840
Genome accession: NC_017067
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3216830 - 3217627 bp
Length : 798 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1838574; Product type t : transporter

DNA sequence :
ATGAGCCAACGCCAAACCGCGACCCTTGCCGCCGACGACATCACCCTGGCGCACCGTCAGTTTGTTGTAGCGGAGAATCT
GAGCCTTCATCTGCCAACGGCCCAGGTCACCGCCATCGTGGGCCCCAACGGCTGCGGAAAATCCACCTTGCTGAATGGCC
TGGCCCGGATTCATACGCCCAAGGGCGGCTTGGTGCTTCTGGACGGCAAGGATATCCATCGCCTGCCGTCCAAAGAGGTC
GCCCGGAAACTGGCCCTGCTACCCCAGGACAACACCGCCCCGGAAGGCCTCACCGTTGCCGACCTGGTGCGCTTCGGCCG
TCAGCCTCATCAGGGCTGGATGGCACAGTGGTCGAAAGAAGACCAACGGGCCTTCGATCAGGCGATACAGGCCGCCGATG
TTGCCGGACTGGCTGACCGTGCACTGGACACTCTCTCTGGCGGGCAACGACAGCGGGCCTGGATTGCCATGGCGGTGGCC
CAGCAAACGCCGCTGTTACTGCTGGACGAACCTACATCGGCCCTGGATCTGGGCCACCAGATTGAAGTGTTTGAGTTGAT
CCGGGCACTGAGCGGACAAGGCAAGACCATCGCCATGGTGGTGCACGACCTGGCCAGTGCCTGTCGCTATGCGGACCATA
TGGTGGCCATGAAAAACGGAACCATTATTGAGGAGGGCGCTCCGGCGGAGATTGTCTCACCGGAGCTGGTGCAGGAACTC
TACGGCGTCAGCTGCGATCTGATTCACGACCCGGCCACCGGTAGCCCGTTACTGGTCAATGTGCGCCGCAATCCCTGA

Protein sequence :
MSQRQTATLAADDITLAHRQFVVAENLSLHLPTAQVTAIVGPNGCGKSTLLNGLARIHTPKGGLVLLDGKDIHRLPSKEV
ARKLALLPQDNTAPEGLTVADLVRFGRQPHQGWMAQWSKEDQRAFDQAIQAADVAGLADRALDTLSGGQRQRAWIAMAVA
QQTPLLLLDEPTSALDLGHQIEVFELIRALSGQGKTIAMVVHDLASACRYADHMVAMKNGTIIEEGAPAEIVSPELVQEL
YGVSCDLIHDPATGSPLLVNVRRNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-56 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-56 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-56 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-56 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-55 47
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-52 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-48 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-49 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-49 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-49 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 6e-49 43
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 7e-48 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 7e-48 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_005431021.1 iron ABC transporter ATP-binding protein BAC0164 Protein 3e-52 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC YP_005431021.1 iron ABC transporter ATP-binding protein VFG0925 Protein 2e-62 52
fepC YP_005431021.1 iron ABC transporter ATP-binding protein VFG1042 Protein 3e-52 45