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Name : kpsD (MARHY2555) Accession : YP_005430442.1 Strain : Marinobacter hydrocarbonoclasticus ATCC 49840 Genome accession: NC_017067 Putative virulence/resistance : Virulence Product : KpsD precursor,outer membrane polysaccharide export OPX familly Function : - COG functional category : - COG ID : - EC number : - Position : 2615638 - 2617383 bp Length : 1746 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter DNA sequence : ATGATCACTCGTCATTTTGCCTCCGTGGTGACGGCGTTGTTATTTGTAGTCACTTCCATAGTGAGTGTGGGTGTGAGCGC TCAAAGCATCGGTGATATACCCGCAAGCCAGCGTGAGCGCCTGATGCCTCAAATCCAGGCGGCAACGGAAAACGCGGGCA GTGGCCCTTCCGAAGCAGATACCGCAGACCAGGAACGCCAAGCTAGAACCCTGAGGTCTACGGGTACTTACGGCCCGATA CTGACGGAACAACAGCAAGAGGAGCTGCAGCCTTTCGGTGCGGAGCTGTTCGCCGGTGGCTTTCGAGGCTTACGTTCAGA CGGGCTCAATCCAGACTACCGCGTTCTGCCGGGCGACCAGGTAACGCTTCGCCTTTGGGGCGCTGTCGAGATGGATCGAG TGCTCCCGGTAGACGCACAAGGCAACATATTCATTCCTGCGGTCGGCCCCGTTCAGGTCGAGGGAGTCAGCCATAGCCAG CTGGATTCCGTTGTGAAAAGTGCTGTGCGCCGTGTCTATCCGGACAATGTGAATGTTTACACCAACCTGCAGGGCGTTCA GCCCGTCTCGGTATTCGTGACTGGCTACGTCAACAAACCGGGCCGGTATGTGGGTGTGCCTAGTGATTCTATCCTTTACC TGCTGGATCAGGCCTCTGGTATAGATGAGGAGCTGGGTAGCTATCGGGACATCAAACTGAGCAGAAATGGCGAAGTTATC GCCCGGATCGATCTATACGATTTTCTACTTCAAGGCACGCTGAACCACCCACAGTTGCAGGAAGGCGACACCCTGCTGGT TGAAAAGCGTGGCCCCGCCATCACCGCATTGGGAGATGTCAGCAAACCCTATCTTTTCGAACTATCCCCAGGCCCTCTTA CAGGCTCCATGCTTAGTGAGCTGGCGCCGTTGCGTCCCGGTGTTTCCCACGCCCTGATTCGTGGAAAGCGCGGTACTGCG CCTTATTCCGAATATTTACCTCTTGAGCGTTTTGAATCTGCTGAACTCGCCAACGGCGATGAAGTCCTGTTTCTGGCTGA TCAGCGCTCCCAGAATCTTGTGGTTCAGTTAGAGGGCGCCTACCTGGGCAAATCTTACTATGTGGTACCCAAAGGCACAT CGCTTCACGAATTGCTGAACGAAATTGCCATCAACCCGGAAGAAACCGCCTGGGAAAGCATCTCGCTGCGCCGGGAAACC GTGGCTGAACGCCAGAAGGAAGCTCTGAACGACAGCCTGCGCCGGCTGGAGACCACCTACCTTGGTGCCTCATCATCCAC TGCAGAAGAATCTGCCATCCGGGTACAGGAGGCGGAATTGATCTCTCGCTTCGTGGAAGAAGCCCGCAAGGTGGAGCCCA ATGGACGCCTGGTGGTGGCCCACCAAGGGAAGCTGGTAGATGTGCGGCTGCAGGATGGCGACACCATTACGCTACCACAG CGCACGGATGCCATCCTCGTGTCCGGTGAGGTCTATATTCCGCAATCCCTGGTGTATATCCCGGGCCGCAGCGCTCGCGA TTACATTGATGCAGCCGGCGGCTTCAGCCAGCATGCCAACCCTGACCATATTCTGATTGCCCGCCAGAATGGTGAGGTAA GGGACGCGGGTGAGGTGCAGCTCCTGCCGGGGGATCAGATACTGGTCCTACCGAAGGTAGAGACCAAGAATCTGCAGATT GCGTCTACGGTTACCCAGATTCTCTATCAGATTGCTGTAGCAACAAAAGTGGCGCTGGATCTGTAG Protein sequence : MITRHFASVVTALLFVVTSIVSVGVSAQSIGDIPASQRERLMPQIQAATENAGSGPSEADTADQERQARTLRSTGTYGPI LTEQQQEELQPFGAELFAGGFRGLRSDGLNPDYRVLPGDQVTLRLWGAVEMDRVLPVDAQGNIFIPAVGPVQVEGVSHSQ LDSVVKSAVRRVYPDNVNVYTNLQGVQPVSVFVTGYVNKPGRYVGVPSDSILYLLDQASGIDEELGSYRDIKLSRNGEVI ARIDLYDFLLQGTLNHPQLQEGDTLLVEKRGPAITALGDVSKPYLFELSPGPLTGSMLSELAPLRPGVSHALIRGKRGTA PYSEYLPLERFESAELANGDEVLFLADQRSQNLVVQLEGAYLGKSYYVVPKGTSLHELLNEIAINPEETAWESISLRRET VAERQKEALNDSLRRLETTYLGASSSTAEESAIRVQEAELISRFVEEARKVEPNGRLVVAHQGKLVDVRLQDGDTITLPQ RTDAILVSGEVYIPQSLVYIPGRSARDYIDAAGGFSQHANPDHILIARQNGEVRDAGEVQLLPGDQILVLPKVETKNLQI ASTVTQILYQIAVATKVALDL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsD | YP_854331.1 | polysialic acid transport protein KpsD precursor | Not tested | PAI I APEC-O1 | Protein | 1e-88 | 43 |
| kpsD | CAE85212.1 | KpsD protein | Virulence | PAI V 536 | Protein | 1e-88 | 43 |
| kpsD | AAZ04468.1 | polysialic acid transport protein precursor | Virulence | PAI I APEC-O1 | Protein | 1e-88 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| kpsD | YP_005430442.1 | KpsD precursor,outer membrane polysaccharide export OPX familly | VFG1448 | Protein | 6e-89 | 43 |
