Gene Information

Name : lolD (MARHY2268)
Accession : YP_005430165.1
Strain : Marinobacter hydrocarbonoclasticus ATCC 49840
Genome accession: NC_017067
Putative virulence/resistance : Resistance
Product : transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2318973 - 2319698 bp
Length : 726 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter

DNA sequence :
ATGGCGTGTCACGCCGACCGGACCGCTCCTGTCTTTCAAACGAAAGGCCTGACCAAAACCTACCGTCAGGGCGATGTGGA
AGTGCATGCCCTGCGGGGGGTCGATATCAGCCTTTATCCGGGGGAGCTGGTAGTTATGCTTGGCGCCTCAGGCTCAGGCA
AATCCACGCTTCTGAACATTCTGGGCGGACTGGATGTGCCCACTACCGGCGAAGTTCGTTATCAGGACATCGATCTGGCC
GGCGCCTCAGACCGGGAGCTTACCCGCTATCGCAGGGATTATGTCGGGTTCGTGTTTCAGTTCTACAACCTCATCCCCAG
CCTTACCGCCCGCGAAAACGTCATCGCCGTGACCGAGATTGCCCGAGACCCCATGGCGCCGGAAGAAGCCCTGGACATGG
TGGGCCTGGCCAGTCGCCTGGACCATTTCCCGGCTCAGCTTTCCGGTGGCGAGCAACAAAGAGTGGCCATTGCCAGAGCC
ATATCCAAGCGACCCCGGGTGCTGCTGTGCGATGAGCCTACCGGAGCCCTGGACTCGGCCACCGGTATTCTGGTCCTCGC
GGCATTGGAACGGGCCAACCGGGAAACCGACACCACCACAGTGATCATCACCCACAATGCTTCAATCGCGAACATGGCGG
ACAGAGTAATCACCCTTTCGGATGGCGTGATCAGCGGTGAGCACCGCAACTCAGAACGCCAGGACCCGAACACCCTGAGC
TGGTGA

Protein sequence :
MACHADRTAPVFQTKGLTKTYRQGDVEVHALRGVDISLYPGELVVMLGASGSGKSTLLNILGGLDVPTTGEVRYQDIDLA
GASDRELTRYRRDYVGFVFQFYNLIPSLTARENVIAVTEIARDPMAPEEALDMVGLASRLDHFPAQLSGGEQQRVAIARA
ISKRPRVLLCDEPTGALDSATGILVLAALERANRETDTTTVIITHNASIANMADRVITLSDGVISGEHRNSERQDPNTLS
W

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_005430165.1 transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) NC_012469.1.7685735. Protein 1e-52 52
lolD YP_005430165.1 transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) CP001581.1.gene798.p Protein 9e-39 45
lolD YP_005430165.1 transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) CP001581.1.gene598.p Protein 3e-37 43
lolD YP_005430165.1 transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) NC_008702.1.4606598. Protein 1e-28 42
lolD YP_005430165.1 transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) NC_012469.1.7686878. Protein 3e-36 41
lolD YP_005430165.1 transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind) NC_012469.1.7686946. Protein 1e-21 41