Gene Information

Name : emrE (MARHY2217)
Accession : YP_005430114.1
Strain : Marinobacter hydrocarbonoclasticus ATCC 49840
Genome accession: NC_017067
Putative virulence/resistance : Resistance
Product : multidrug resistance protein; DLP12 prophage
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2260278 - 2260610 bp
Length : 333 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 1936950; Product type h : extrachromosomal origin

DNA sequence : 
ATGAAAAGCTGGCTGCTTCTTGGTCTGGCCATTGTGGCCGAAGTGATTGCTACCTCGGCACTGAAATCCAGCGAAGGATT
CACCCGGTTGATGCCGAGCGTTGTGGTCGTGATCGGTTACAGTGTGGCCTTCTATTTTCTGGCGCTGGCTATCAAGGTGA
TCCCTGTGGGGATAGCCTATGCCGTCTGGGCCGGGCTGGGCATTGTATTAATTTCGCTCATTGGTTGGTTACTGCTCGGG
CAAAAGCTGGATTTTCCTGCGGTTGTCGGTATGCTGCTGATTGTAGCCGGCGTTTTGGTTATCAACCTGCTTTCCAACAC
AGGTGCACACTGA

Protein sequence : 
MKSWLLLGLAIVAEVIATSALKSSEGFTRLMPSVVVVIGYSVAFYFLALAIKVIPVGIAYAVWAGLGIVLISLIGWLLLG
QKLDFPAVVGMLLIVAGVLVINLLSNTGAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 7e-27 67
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 7e-27 67
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 1e-26 67
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 7e-27 67
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 7e-27 67
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 1e-26 67
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 7e-27 67
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 7e-27 67
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 7e-27 67
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 1e-26 67
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 7e-27 67
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 7e-27 67
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 7e-27 67
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 1e-26 67
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 7e-27 67
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 7e-27 67
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 7e-27 67
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 7e-27 67
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 7e-27 67
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 7e-27 67
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 7e-27 67
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 7e-27 67
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 7e-27 67
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 7e-27 67
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 7e-27 67
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 7e-27 67
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 7e-27 67
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 7e-27 67
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 1e-26 67
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 7e-27 67
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 2e-16 45
unnamed CAD42068.1 hypothetical protein Not tested PAI II 536 Protein 3e-15 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage BAC0322 Protein 5e-31 70
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage BAC0324 Protein 2e-31 70
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage BAC0323 Protein 3e-27 67
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage BAC0377 Protein 1e-22 62
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage CP001138.1.gene1489. Protein 3e-27 62
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage CP004022.1.gene1549. Protein 1e-24 60
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage NC_002695.1.913273.p Protein 4e-24 60
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage BAC0150 Protein 6e-24 58
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage BAC0002 Protein 2e-24 55
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage NC_010410.6003348.p0 Protein 2e-24 55
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage BAC0192 Protein 8e-17 49
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage BAC0140 Protein 3e-15 45
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage BAC0329 Protein 5e-15 44
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage BAC0326 Protein 2e-14 42
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage BAC0139 Protein 3e-15 41
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage BAC0477 Protein 4e-10 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage VFG1586 Protein 1e-16 45
emrE YP_005430114.1 multidrug resistance protein; DLP12 prophage VFG1587 Protein 1e-15 42