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Name : gspF (MARHY2042) Accession : YP_005429942.1 Strain : Marinobacter hydrocarbonoclasticus ATCC 49840 Genome accession: NC_017067 Putative virulence/resistance : Virulence Product : general secretory pathway component, cryptic Function : - COG functional category : - COG ID : - EC number : - Position : 2082766 - 2083977 bp Length : 1212 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; Product type t : transporter DNA sequence : ATGCCGGCCTACGAATACAAAGCACTGGATGCCAGAGGCAAGCAGAAACAGGGCGTGCTGGAAGCCGACGCGCCCAGAGC GGTGCGCCAGCAACTCAGGGAAAAGGGGCTGACCCCGCTGGCAGTGGAAGCGGCCGTAGAAAAACAGGCCCGTAGCAACC CACTGAGCAGCCGCGGTTCTCTGAGCGCAGCCGATCTCGCCCTGGTCACCCGGCAGCTGGCCACGCTCATCCAGTCCGGG ATTCCGGTCGAGCAGGCACTGAGTGCGGCCGCCCAGCAATCCACCAAGCCGCGGATTCGCAGCATGCTGATTGCTATCCG CGCCAAGGTGATGGAAGGCTACACACTGGCGGACAGCTTCGGTGAATTCCCCAAGGCCTTTCCCCGGCTCTACCGCTCCA CGGTCGCGGCCGGTGAACATGCCGGGCATCTGGACCTGGTGCTGAACCGGCTGGCGGACTACACGGAAAGCCGCCAAGAA GCCCGCCAGAAGATTCAGTTGGCTGCGATTTACCCGATTATCCTGAGTGTCGTAGCTATTGCCATTGTGGTGTTCCTGCT CACCTATGTGGTGCCCGACATTATCGAAGTCTTTCTCAAGCAGGGGCAGGAGCTGCCCGCGCTGACGGTAGCTATGCTCT CGGTGTCGGAATTTCTCGGCAGTTTCGGAGTCTACCTTCTAGTGTTGCTGGTGGTGGCGATCATCGGGTTCCGTTTCGCG TTGACCAAGCCGGCGGTGCGTCTGAAGTTTCACAAGCGGCTACTTCACCTGCCGCTGTTTGCAGGCATGGTACGAGGCGT GAATACGGCTCGCTACGCCAGTACCCTGAGCATTCTGACCACCAGTGGTGTACCACTGGTTGAAGCCATGCGCATTGCAG GGGAGGTGCTTTCCAACGATTACCTCCGGCAGGAACTGCGGGAGGCTGCCCGGAAGGTCAGTGAAGGGGGATCGTTGCAC CGTTCACTGGACCAGACCGGTTACTTCCCGCCAATGATGCTGCATATGATTGCCAGTGGCGAGGCCAGTGGCGAGCTGGA CAGTATGCTTGAACGCACGGCCCGCATGCAGGAAAACACCCTGCAATCCAAGATCGCCGCTATTGTGGGATTGTTTGAAC CCATGATGCTGCTGTTCATGGGGGCGGTGGTGCTGATTATTGTTCTGGCGATCATGCTGCCGATTCTGAACATGAGCAAC CTGGTGGGATGA Protein sequence : MPAYEYKALDARGKQKQGVLEADAPRAVRQQLREKGLTPLAVEAAVEKQARSNPLSSRGSLSAADLALVTRQLATLIQSG IPVEQALSAAAQQSTKPRIRSMLIAIRAKVMEGYTLADSFGEFPKAFPRLYRSTVAAGEHAGHLDLVLNRLADYTESRQE ARQKIQLAAIYPIILSVVAIAIVVFLLTYVVPDIIEVFLKQGQELPALTVAMLSVSEFLGSFGVYLLVLLVVAIIGFRFA LTKPAVRLKFHKRLLHLPLFAGMVRGVNTARYASTLSILTTSGVPLVEAMRIAGEVLSNDYLRQELREAARKVSEGGSLH RSLDQTGYFPPMMLHMIASGEASGELDSMLERTARMQENTLQSKIAAIVGLFEPMMLLFMGAVVLIIVLAIMLPILNMSN LVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 2e-70 | 47 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-70 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspF | YP_005429942.1 | general secretory pathway component, cryptic | VFG0181 | Protein | 2e-107 | 60 |
| gspF | YP_005429942.1 | general secretory pathway component, cryptic | VFG1870 | Protein | 1e-81 | 46 |
| gspF | YP_005429942.1 | general secretory pathway component, cryptic | VFG2049 | Protein | 3e-67 | 46 |
