Gene Information

Name : qseB (MARHY1917)
Accession : YP_005429817.1
Strain : Marinobacter hydrocarbonoclasticus ATCC 49840
Genome accession: NC_017067
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator in two-component regulatory system with QseC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1982682 - 1983347 bp
Length : 666 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; Product type r : regulator

DNA sequence : 
ATGCGGGTTCTTTTGGTGGAGGATACGGCGGGATTGGGCGAGGCGGTCCGGGATCAGATTGCGGACGACGGCCACGCCGT
GGACTGGGTGCAAACTCTGCGCTTTGCTGAGGCGAGTATCAGGACCACAGCCTACGACCTGATTCTGCTGGACCTGATGC
TGCCCGACGGCCATGGCTTCGGCTTTTTGCGAACGATCCGGGCTACCGGAATAACAACACCGGTGATCATTCTGACCGCC
AGGGATCAGGTGTCTGACCGGATTGAAGGATTGAATGCCGGTGCTGACGACTACCTGGTCAAACCCTTTGATCTTTCGGA
GTTGTCGGCCCGCGTGGCCGCGGTGGCTCGCCGATATCGCGGCAATCCAAGCCCGATCATACAAGTGGGCGAGCTGATGA
TTGATCTTGGCGATCACCGCATCAGTCGCAACGGCCTGCCGGTAGAACTTACGGCACGGGAGTGGGCATTGTTTGAGGGC
TTTATCCAGCGACCCGGAATGCTGTTATCGCGATCGCAACTGGAGGATCGTCTATACGCTTTCGGGGCCGAAATCGAAAG
TAACACCATCGAAGTTTATGTCAGCCGTCTGCGTAAAAAGCTGGGGCGGGACGCTATCGTAACCGTCAGGGGAATGGGCT
ATCGCCTGGAAACACATGACCACTAG

Protein sequence : 
MRVLLVEDTAGLGEAVRDQIADDGHAVDWVQTLRFAEASIRTTAYDLILLDLMLPDGHGFGFLRTIRATGITTPVIILTA
RDQVSDRIEGLNAGADDYLVKPFDLSELSARVAAVARRYRGNPSPIIQVGELMIDLGDHRISRNGLPVELTAREWALFEG
FIQRPGMLLSRSQLEDRLYAFGAEIESNTIEVYVSRLRKKLGRDAIVTVRGMGYRLETHDH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_005429817.1 DNA-binding response regulator in two-component regulatory system with QseC BAC0083 Protein 6e-29 42
qseB YP_005429817.1 DNA-binding response regulator in two-component regulatory system with QseC BAC0487 Protein 1e-30 41
qseB YP_005429817.1 DNA-binding response regulator in two-component regulatory system with QseC NC_008702.1.4607594. Protein 4e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_005429817.1 DNA-binding response regulator in two-component regulatory system with QseC VFG0473 Protein 1e-31 43