Gene Information

Name : insC (MARHY1909)
Accession : YP_005429809.1
Strain : Marinobacter hydrocarbonoclasticus ATCC 49840
Genome accession: NC_017067
Putative virulence/resistance : Unknown
Product : IS2 insertion element repressor InsA; KpLE2 phage-like element
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1974741 - 1975118 bp
Length : 378 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 16397293, 16738553, 2830172, 7610040, 9097039, 9097040, 9278503; Product type r : regulator

DNA sequence :
GTGGAGAGAATCGAAGTCATAACCGGAGTGCAGCGCCGTCGCCGGTATTCCGCGCAGGAGAAAGCATTCATGGTTGCAGA
GTGTGAGCAGCCAGGCATGTCGGTATCGCTTGTAGCCCGGCGTCATGGTATATCAGCAAGTCTGTTGTTCCGTTGGAAGA
AGCTGATGAAAGACGGTGGCATGTCCGCGATTGAATCCGGTGATGAGGTTGTAAGCGCATCCGAGGTGAAAGCCCTGAAC
AAGAAGGTTCGGGAGCTGGAGCGGATGTTGGGCCGCAAGACGATGGAAGCTGAAATACTCCGGGAAGCCCTGGAGGTGGT
TCAGTCAAAAAAGTTGATCTCGCGCATGCCGTTGCTGCCACCGGACGATACCCTCTGA

Protein sequence :
MERIEVITGVQRRRRYSAQEKAFMVAECEQPGMSVSLVARRHGISASLLFRWKKLMKDGGMSAIESGDEVVSASEVKALN
KKVRELERMLGRKTMEAEILREALEVVQSKKLISRMPLLPPDDTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c5196 NP_757044.1 transposase insC Not tested PAI II CFT073 Protein 2e-22 55
insC AAZ04431.1 IS2 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-22 55
insC YP_854262.1 IS2 transposase Not tested PAI I APEC-O1 Protein 2e-22 55
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 2e-25 50
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 2e-25 50
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 2e-25 50
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 2e-25 50
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 2e-25 50
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 2e-25 50
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 8e-25 49
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 2e-25 49
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 1e-24 48
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 1e-24 48
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 3e-25 48
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 3e-18 45
insC YP_002414034.1 IS2 insertion element repressor InsA; KpLE2 phage-like element Not tested Not named Protein 7e-18 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insC YP_005429809.1 IS2 insertion element repressor InsA; KpLE2 phage-like element VFG0622 Protein 3e-25 48
insC YP_005429809.1 IS2 insertion element repressor InsA; KpLE2 phage-like element VFG0609 Protein 3e-25 48
insC YP_005429809.1 IS2 insertion element repressor InsA; KpLE2 phage-like element VFG0648 Protein 9e-26 48
insC YP_005429809.1 IS2 insertion element repressor InsA; KpLE2 phage-like element VFG1733 Protein 2e-18 44