Gene Information

Name : fliP (MARHY1320)
Accession : YP_005429221.1
Strain : Marinobacter hydrocarbonoclasticus ATCC 49840
Genome accession: NC_017067
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1369558 - 1370319 bp
Length : 762 bp
Strand : +
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7622217; Product type cp : cell process

DNA sequence : 
ATGGTGGTGGCCATTCTCAAACGCGGTTTTCCCTGGCTTGCGCTGATTGCCGGCCTTTGTCTTCCCGCCCTGGCCCAGGC
TGATCTGCCCGGCATTCCGGCATTTACGGTTGAGCCCGGCGAGAACGGCACCGAGGAGTACTCGGTAACCCTGCAGATCC
TGGCGCTGATGACCGCGCTGACTTTCCTGCCGGCCATGCTGATGATGATGACCTCGTTTACCCGGATCATCGTGGTCTTT
GCGATTCTTCGTCAGGCTCTGGGGCTACAGGCCACACCCTCCAACCAGATTTTGCTGGGGCTGGCGCTGTTTCTGAGCAT
TTTTATCATGAAGCCGGTGCTGGAAGAGGCGAACCGGGTCGGCCTGCAACCATACCTGCAGGAAGAGGTGACTTCACTGG
AGGCGGTGGAACTGGCCAGCCAGCCGTTTCGCAAGTTTATGCTGGAACAGACTCGAGAAGACGACCTGGCGCTGTTCATG
AGGATTGCCGATGTTCAGTATGAAACACCGCAGGACGTGTCTTTCTGGATTCTGATGCCAGCGTTTGTCACCAGTGAACT
GAAGACGGCGTTCCAGATCGGGTTTATTCTGTTTATACCATTCCTGATCATCGACATGGTGGTGGCCAGTGTTCTGATGG
CCATGGGTATGATGATGCTGTCACCCATTATCATCTCGCTGCCGTTTAAAATCATGCTGTTTGTGCTGGTGGATGGCTGG
GCCCTGATCATGGGAACTCTGGCCGCCAGTTACGGGATCTAG

Protein sequence : 
MVVAILKRGFPWLALIAGLCLPALAQADLPGIPAFTVEPGENGTEEYSVTLQILALMTALTFLPAMLMMMTSFTRIIVVF
AILRQALGLQATPSNQILLGLALFLSIFIMKPVLEEANRVGLQPYLQEEVTSLEAVELASQPFRKFMLEQTREDDLALFM
RIADVQYETPQDVSFWILMPAFVTSELKTAFQIGFILFIPFLIIDMVVASVLMAMGMMMLSPIIISLPFKIMLFVLVDGW
ALIMGTLAASYGI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 1e-22 43
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 9e-28 43
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 2e-23 43
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 1e-23 43
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 2e-23 43
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 2e-23 42
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 2e-23 42
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 2e-23 42
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 1e-22 42
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 3e-16 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 3e-16 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 3e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_005429221.1 flagellar biosynthesis protein VFG1259 Protein 4e-61 66
fliP YP_005429221.1 flagellar biosynthesis protein VFG2494 Protein 1e-53 59
fliP YP_005429221.1 flagellar biosynthesis protein VFG2338 Protein 7e-49 57
fliP YP_005429221.1 flagellar biosynthesis protein VFG2016 Protein 6e-54 57
fliP YP_005429221.1 flagellar biosynthesis protein VFG0394 Protein 8e-26 42
fliP YP_005429221.1 flagellar biosynthesis protein VFG0188 Protein 4e-24 42