|
Name : insD (MARHY1125) Accession : YP_005429028.1 Strain : Marinobacter hydrocarbonoclasticus ATCC 49840 Genome accession: NC_017067 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 1161461 - 1162276 bp Length : 816 bp Strand : + Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 16738553, 2830172, 7610040, 9097039, 9097040, 9278503; Product type e : enzyme DNA sequence : GTGCTGAAGGTGTCGCGCTCCAATCTTTTGGATCGCCTTCATGGTCGCCAGAAAGGCCGAAGCCCGAGATACAGCAAACA GGACGATGACCGGCATTTACCGTTTATCCGTGAGCTGTGCGAGGCCCGTGCTGCCAATGGCTATCGAAGGATCACGGCTC GACTGAATCGGTTGCTCGCAGCCAACGATGAGCGAGTAAACCACAAGCGCGTGTACCGACTGATGAAGCAGAATGGGCTG CTGTTACCCCGGTATACAGGGCGACCTCAAGAGCGCTGCCACAATGGCCAGGTTATTACGTTGAAGCCGGACCTTCGCTG GTGCTCAGATGGCTTGGAGATCCGCTGCTGGAACAAGGAGGTTGTCCGTGTAGCCTTCAGCCTGGACTGCTGTGATCGTG AGCTGATGCGCTATGTAGCGACCACTGGTGGCATCACCGGTGAGATGGTTCAGGACCTGCTGCTGGAAAGCTTGGAATAC CGGTTCGGCCAGTCAGAGCGAGTGCCTCATCCACTGGAGTGGCTGACTGACAATGGCAGTTGCTACATTGCCAAAGAAAC GCGAGCCTTCGCGTCCTCTCTGGGCTTTGTCGTGTGTACCACACCGGTGAGAAGCCCTCAGAGCAATGGCATGGCTGAGG CCTTCGTGAAGACGTTCAAGCGGGACTATGTGTACCTGAACGATCTTCCTGATGCCGCCACAGTGATGGCCAGGTTGCCG GAATGGATCGAGGACTATAACCGCAGCCACCCGCACAAGGGGCTGAAAATGAAATCGCCCTGGGAGTACCGGGCGGAACT GGCATCAAACGAATGA Protein sequence : MLKVSRSNLLDRLHGRQKGRSPRYSKQDDDRHLPFIRELCEARAANGYRRITARLNRLLAANDERVNHKRVYRLMKQNGL LLPRYTGRPQERCHNGQVITLKPDLRWCSDGLEIRCWNKEVVRVAFSLDCCDRELMRYVATTGGITGEMVQDLLLESLEY RFGQSERVPHPLEWLTDNGSCYIAKETRAFASSLGFVVCTTPVRSPQSNGMAEAFVKTFKRDYVYLNDLPDAATVMARLP EWIEDYNRSHPHKGLKMKSPWEYRAELASNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL67379.1 | transposase-like protein | Not tested | PAI II CFT073 | Protein | 3e-44 | 53 |
| unnamed | CAC39284.1 | hypothetical protein | Not tested | LPA | Protein | 1e-44 | 49 |
| SF2985 | NP_708759.1 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 1e-43 | 49 |
| ECO111_3773 | YP_003236109.1 | putative IS2 transposase InsAB | Not tested | LEE | Protein | 7e-44 | 49 |
| tnpF | AAD44739.1 | TnpF | Not tested | SHI-2 | Protein | 3e-43 | 48 |
| insD | YP_002414033.1 | insertion element IS2 transposase InsD | Not tested | Not named | Protein | 3e-45 | 48 |
| aec49 | AAW51732.1 | Aec49 | Not tested | AGI-3 | Protein | 5e-42 | 47 |
| S4061 | NP_839230.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 2e-44 | 47 |
| S4050 | NP_839218.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 1e-44 | 47 |
| SF3708 | NP_709447.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 1e-44 | 47 |
| SF3721 | NP_709460.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 1e-44 | 47 |
| S3189 | NP_838472.2 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 4e-45 | 47 |
| unnamed | CAC39283.1 | hypothetical protein | Not tested | LPA | Protein | 6e-44 | 44 |
| c5197 | NP_757045.1 | transposase insD | Not tested | PAI II CFT073 | Protein | 6e-31 | 43 |
| insD | YP_854263.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 1e-31 | 43 |
| insD | AAZ04432.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 9e-32 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| insD | YP_005429028.1 | transposase | VFG0649 | Protein | 6e-44 | 49 |
| insD | YP_005429028.1 | transposase | VFG1732 | Protein | 1e-45 | 48 |
| insD | YP_005429028.1 | transposase | VFG0621 | Protein | 4e-45 | 47 |
| insD | YP_005429028.1 | transposase | VFG0608 | Protein | 4e-45 | 47 |
