|
Name : RTTH1527_03705 (RTTH1527_03705) Accession : YP_005427828.1 Strain : Rickettsia typhi TH1527 Genome accession: NC_017066 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 981515 - 982792 bp Length : 1278 bp Strand : + Note : COG0172 Seryl-tRNA synthetase DNA sequence : ATGTTAAATATCAAATGGATTAGAGAAAATCAAGAATTATTCGATGAAAAATTGAGCCAAAGATTTATTGAACCTATGTC TAGTAAAATTGCTATGCTAGACCGAGAAAAAAGAAAAATTACGAGTTTAATTCAGGAATTTCAGCATGCACGTAAGGTAA AATCAAAGATTTTAGGTAATATGGTCTCTAAAAGTGGCGAAGAGTTTGAAGAATTACAAAGAGATGTTAACCATATAAAT GAGAAGTTAGAAGAACTTGAACAAACTCTAGATAATAATAACGAATTAAATGAACTATTAAATATGCTTCCTAATATTCC GGACGAGGAAGTACCTTACGGGATCGATGAAAGTATGAATAAATTAGTGCGTTCTTACGGCAACACAAATAAAAATGCTT TGAATAAACAGCATTTTGAATTAGGTACAAAATTAAATTTAATGGATTTTGAACAAACAGCTAAAATTTCTGGATCTAGA TTTGTAACGTTAAAAGGTGATTTAGCAAAGTTAGAACGTGCTTTAATTAATTTTATGGTTGACATTCATACTAAAGAGTT TGACTTCTTTGAGATATCACCTCCATTATTAGTTCGAGATAGTGCTATGTATAATGCAGGACAACTACCTAAGTTTTCTG AAGAATCTTTTATAACAACAAATGGTTATAGACTAATTCCAACCGCAGAAGTATCTTTAGTAAATATAGTAGCCGATACT ATTATACAAAGAGAAAAATTACCTATGCGTTACGTTGCTTACACCACGTGTTTTAGATCAGAAGCAGGTAGTAGTGGTAG AGATACAAGAGGCATGATTAGATTACATCAGTTTGGTAAAGTTGAACTCGTATCTATTACTACCCCTGAAGAATCAAAAA ATGAGCATGAATATATCACTAATGCATCAGAGACGATTTTAAAAAAACTCGATCTCCCGTATCGTGTTATGCTACTTTGT ACTGGCGATATGGGATTTGCAGCGAAAAAAACTTATGATATAGAAGTATGGCTTCCTGGACAAAATCAATATCGTGAAAT TGCAAGCTGTTCTAATTGTGGTGATTTTCAAGCACGTAGAATGAAAGCAAGATATAAGGAATTCGGTAGTAATGAAACTA CATTAGTACATACTTTAAATGCTTCAGGATTACCTATTGGTAGAACTATAGTTGCAATACTTGAGAATTATCAGAATAAC GATGGATCAATAACTATACCTGATGTCTTAATAAATTACATGGGAGGATTAAAAAAAATCACTACATATAGTGAATAA Protein sequence : MLNIKWIRENQELFDEKLSQRFIEPMSSKIAMLDREKRKITSLIQEFQHARKVKSKILGNMVSKSGEEFEELQRDVNHIN EKLEELEQTLDNNNELNELLNMLPNIPDEEVPYGIDESMNKLVRSYGNTNKNALNKQHFELGTKLNLMDFEQTAKISGSR FVTLKGDLAKLERALINFMVDIHTKEFDFFEISPPLLVRDSAMYNAGQLPKFSEESFITTNGYRLIPTAEVSLVNIVADT IIQREKLPMRYVAYTTCFRSEAGSSGRDTRGMIRLHQFGKVELVSITTPEESKNEHEYITNASETILKKLDLPYRVMLLC TGDMGFAAKKTYDIEVWLPGQNQYREIASCSNCGDFQARRMKARYKEFGSNETTLVHTLNASGLPIGRTIVAILENYQNN DGSITIPDVLINYMGGLKKITTYSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-78 | 45 |
