Gene Information

Name : hemC (MC3_04240)
Accession : YP_005426500.1
Strain : Rickettsia slovaca D-CWPP
Genome accession: NC_017065
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 729418 - 730473 bp
Length : 1056 bp
Strand : -
Note : COG0181 Porphobilinogen deaminase

DNA sequence :
ATGACAAATTCTATCAGAATAGGTACAAGAAAAAGTCCACTTGCTTTAATACACACTAATTTAGTTATTCAGCAAATCAA
ACAATTTTTTCCTGATATCAATTGTGAAATAGTGCCGATTATTACTAGCGGGGATTTAATCCAAAATAAACCATTATACG
ATATAGGCGGTAAAGCTTTATTTTTAAAGGAAATAGAGCAAGCCTTGCTTGATAAAAAAATTGACTTAGCTGTTCATTCT
TTAAAAGATGTACCGGGTAGAATACCTGAACCGCTAGTAATAGCTGCTGTTTTAGAGCGTGAAGACCCCAGAGATGTTTT
TGTTTGTCTAAAATATAAATCTATAGAAGAGCTGCCGCAAAATGCCGTAATAGGTAGCTCGGCAGTACGAAGAAAAGCAT
TTATCCAAAAAATAAGACCGGATTTAAAGGTAACGGTTTTTAGAGGGAATGTTGATTCAAGAATAAAAAAGCTAATGACC
GGCGAAGTTGACGCAACAATTTTAGCATATACAGGTCTTAAAAGGTTAGAGGTGTTTAATCCGGAGTATTGCCATTTGAT
AGAGTATTCACAGATGTTACCGTGTATAGGGCAGGGAGTCATTGCAGTTGAGATTAGAAAAGATGATAATGCTATGCTTG
AGATATGCAACCAAATTAATCATCTTCCCACTTTTGAACTCATAAAACCCGAAAGAGCATTTTTAGAGTATCTAGATGCT
AATTGCCGCACCCCGATTGCTGCTTATTCACAATATCTAGATGCAAATCCTAGACATCTTTCCAAACTCGCTTATAGGGA
GGTATTTGAAGGAAACACAGAAGCACTTGCCACCGCAGCGTACAAAAGCAATCGCACAGATGCGAGTACCGGATTGACGT
ACAAATTACCCCTAGAAGTAGAGTTTGGGAAGATGTCTAATATACAAACCAATTTTATGCTCGGTAACCTTGACGGCAGT
AAAATAACTTTCCATACCGAAACTACCAATATAAAAACTTCAACAGAAGCAGGCATAAAAGCCGCTAAAATGATGTTGGA
AGCTATCTGTAAATAA

Protein sequence :
MTNSIRIGTRKSPLALIHTNLVIQQIKQFFPDINCEIVPIITSGDLIQNKPLYDIGGKALFLKEIEQALLDKKIDLAVHS
LKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMT
GEVDATILAYTGLKRLEVFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLEICNQINHLPTFELIKPERAFLEYLDA
NCRTPIAAYSQYLDANPRHLSKLAYREVFEGNTEALATAAYKSNRTDASTGLTYKLPLEVEFGKMSNIQTNFMLGNLDGS
KITFHTETTNIKTSTEAGIKAAKMMLEAICK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-46 45
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-46 45