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Name : HPELS_04965 (HPELS_04965) Accession : YP_005425101.1 Strain : Helicobacter pylori ELS37 Genome accession: NC_017063 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : 2.2.1.1 Position : 1010545 - 1012470 bp Length : 1926 bp Strand : + Note : COG0021 Transketolase DNA sequence : ATGCGATTGAGTAACGCTGACTTAGAACGATTAAAAAGCATGGCGAATGCGCTTCGCTTTTTGTGCGCGGACATGATAGA TAAGGCTAATAGCGGGCATCCAGGCGTGTGCTTAGGGCTAGCTGATGTGATGGTGGTTTTAAGCTTGCACCTTAATATAA ACCCCACCAACCCTAAATGGCTCAATAGGGACAGGTTGGTTTTTAGCGGAGGGCATGCGAGCGCGTTAGCGTATAGTTTG TTGCATTTGTGGGGCTTTGATTTGAGTTTAGAAGATTTAAAGCGTTTCAGGCAATTACACTCTAAAACCCCAGGACACCC CGAATTGCACCACACCGAAGGCATTGAAATCACCACAGGCCCTTTGGGGCAAGGTTTTGCTAACGCTGTGGGCTTTAGCA TGGCGAGTCAATACGCTCAAACCCTTTTGGATAAAAAAACGATCTCTCATAAAGTCTATTGCTTGTGTGGGGATGGGGAT TTGCAAGAAGGCATTAGCTATGAGAGCGCTTCTTTAGCCGGACACTTTCGCCTTGATAACCTCATTGTGATTTATGATAG TAATCAGATCAGTATTGAAGGCGCTATTAATATCAGTTTTAGCGAACAGGTTAAAATGCGGTTTGTGGCGCAAAATTGGG AAGTGCTAGAATGCGATGGGCATGACTATCAAGCGATTAATGATGCTTTAGAAGAAGCCAAAAAATCCCATAAACCCACG CTTTTAATCGCTCATACGATTATTGGTAAGGGGGCTATTGGCTTAGAGGGGAGTGAAAAAACGCATGGCTCGCCTTTAAA CAAAGAAGTGTTAAAACAATCCAAAGAAAACGCTCAAATCAATCCTAGTGAAAGCTTTATCATTAGCCCAAAAAACAAAA TGCATTTTGAAGAAGTGAAAGTTAGGGGCGTTAGTTTAGAAGCCTTATGGGAAAAGTCCTTAAGCCCTAAAACAAAAGAA AAGATCCATGCGTTAAAGGATTTTGATTTTAACGCCATCCATTACCCCACCTTTAAAAAAGGCGAATCTCTAGCCACGAG AGTGAGTAACGGCATGATTTTAAACGCTATCGCTAAAGAATGCGAGAGTTTTTTGGGAGGGAGCGCGGATTTAGCCCCAT CCAATAACACGCATTTGAAACATTCTGGCGATTTCCCTTTAGGGCAAAACTTGCATTTTGGGATCAGAGAGCATGCCATG GGGGCTATCACTAACGCTTTAGCGGCGTATGGCTTGTTTTTGCCTTTTTGCGCAACCTTTTTTGTGTTTAGCGATTATTT AATGCCCAGCATGCGTTTGAGCGCTTTAATGAAACTGAAAGCCCTTTTTATCTTCACGCATGACAGCATTGGGGTGGGCG AAGACGGGGCGACGCACCAGCCCATAGAGCAATTGAGCCATTTACGCGCTTTGCCCAACTTCTATGCTTTCAGGCCTAGC GACGCTTTTGAAAATACGGCTTGCATGCAAGTAGCGTTAAGTTTGAACGCCCCTAGCACTCTTATTTTATCGCGCCAAAA TTTACCCGTGCTTGATGAGGTTTCTAAAGAGCAGGTTTTAAAAGGGGCGTATGTTAAACACCATTCTAAAGATCCCATTA TCACGCTCGTTGCGAGCGGGAGCGAGGTCTCTTTGGCTTTAGAGAGCGCTAAGATTTTAGAGCGAGAAAATATCCCCACT CAAGTGGTGAGCACGCCGTGCTTTGACTTGTTGGTAGAGCAAGATGAAAGCTATTTTAAAGAACTCTTTAAGGGTAAAGT CTTAGTCATTGAAGCGAGCCGCGCGATAGAGTGGTATCGTTTTGCGGATAAAATCATTGGCATGGATTCTTTTGGGAGCT CAGCAAAGGGCGATAAACTCTTTGAAAAATTTGGCTTTAGCGTTGAAAACATTACCGCTCAAGCGAAAAGATTACTCAAC GCATGA Protein sequence : MRLSNADLERLKSMANALRFLCADMIDKANSGHPGVCLGLADVMVVLSLHLNINPTNPKWLNRDRLVFSGGHASALAYSL LHLWGFDLSLEDLKRFRQLHSKTPGHPELHHTEGIEITTGPLGQGFANAVGFSMASQYAQTLLDKKTISHKVYCLCGDGD LQEGISYESASLAGHFRLDNLIVIYDSNQISIEGAINISFSEQVKMRFVAQNWEVLECDGHDYQAINDALEEAKKSHKPT LLIAHTIIGKGAIGLEGSEKTHGSPLNKEVLKQSKENAQINPSESFIISPKNKMHFEEVKVRGVSLEALWEKSLSPKTKE KIHALKDFDFNAIHYPTFKKGESLATRVSNGMILNAIAKECESFLGGSADLAPSNNTHLKHSGDFPLGQNLHFGIREHAM GAITNALAAYGLFLPFCATFFVFSDYLMPSMRLSALMKLKALFIFTHDSIGVGEDGATHQPIEQLSHLRALPNFYAFRPS DAFENTACMQVALSLNAPSTLILSRQNLPVLDEVSKEQVLKGAYVKHHSKDPIITLVASGSEVSLALESAKILERENIPT QVVSTPCFDLLVEQDESYFKELFKGKVLVIEASRAIEWYRFADKIIGMDSFGSSAKGDKLFEKFGFSVENITAQAKRLLN A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-96 | 41 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 3e-87 | 41 |
