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Name : HPELS_03975 (HPELS_03975) Accession : YP_005424915.1 Strain : Helicobacter pylori ELS37 Genome accession: NC_017063 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein (cag7) Function : - COG functional category : - COG ID : - EC number : - Position : 807016 - 812586 bp Length : 5571 bp Strand : - Note : COG2948 Type IV secretory pathway, VirB10 components DNA sequence : ATGAATGAAGAAAACGATAAACTTGAAACTTCTAAAAAAGCCCAACAAGATTCACCCCAAGATCTATCTAATGAAGAAGC AACAGAAGCCAATCATTTTGAAGATCCTTTAAAAGAAGAAAGTTCAGATAATCATCTTGACAATTCCACAGAAACTAAAA CCCAAGAAACTAAAACCCATTTTGATGAAGACAAGCTAGAAGAAACCCAAACTCAAATGGATTCTGGAGGTAATGAAACT TCAGAATCTAGCAATGGCAGTCTGGCAGACAAGTTATTCAAGAAAGCCAGAAAATTAGTTGATGATAAAAGACCTTTCAC TCAGCAAAAGAGTTTAGATGAAGAAGCCCAAAAACTGAACAAAGAAGACGATCAAGAAAATAATGGGTATCAAGAAGAAA CTCAAACGGACTTAATTGATGATGAAACTTCTAAAAAAGCCCAACAAGATTCACCCCAAGATCTATCTAATGAAGAAGCA ACAGAAGCCAATCATTTTGAAGATCTTTTAAAAGAATCCAAAGAAAGCTCAGACAATCATCTTGACAACCCCACAGAAAC TAAAACCCATTTTGATAAAGACAAGCTAGAAGAAACCCAAACTCAAATAGATTCTGGAGGTAATGAAACTTCAGAATCTA GCAATGGCAGTCTAGCAGATAAGTTATTCAAGAAAGCCAGAAAATTAGTTGATGATAAAAGACCTTTCACTCAGCAAAAG AGTTTAGATGAAGAAGCCCAAAAACTGAACAAAGAAGACGATCAAGAAAATAATGGGTATCAAGAAGAAACTCAAACGGA CTTAATTGATGATGAAACTTCTAAAAAAACCCAACAACATTCACCCCAAGATCTATCTAATGAAGAAGCAACAGAAGTCA ATCATTTTGAAGATTCTTTAAAAGAAGAAAGCTCAGACAATCATCTTGACAACCCCACAGAAACTAAAACCAATTTTGAT GGAGACAAGTCAGAAGAAATAACTAACGACTCTAACGATCAAGAGATTATCAAAGGAAGCAAAAAGAAATACATTATTGG CGGCATTGTAGTCGCTGTTCTTATCGTGATTATTTTATTTTCTAGAAGCATTTTTCACTACTTTGTACCTTTGGAAGATA AAAGCTCTCGTTTTAGCAAAGACAGGAATCTTTATGTTAATGATGAAATCCAAATAAGGCAAGAGTATAACCGATTGCTG AAAGAACGAAATGAAAAAGGCAATATGATCGATAAGAATCTTTTCTTCAATGACGATCCCAATAGAACCTTATACAACTA TTTGAATATTGCAGAAATTGAGGACAAAAACCCATTGAGAGCCTTTTATGAGTGTATTAGTAATGGTGGCAACTATGAAG AATGTTTGAAGCTTATCAAAGACAAAAAACTTCAAGATCAAATGAAAAAGACTCTAGAGGCTTATAATGACTGCATCAAA AATGCCAAAACTGAAGAAGAAAGGATTAAGTGTTTAGATTTAATCAAAGATGAAAACCTGAAAAAAAGCTTACTGAACCA ACAAAAAGTTCAAGTGGCTCTAGATTGTTTGAAAAACGCTAAAACCGATGAAGAACGGAAAGAGTGCCTAAAACTCATAA ATGACCCTGAGATTAGAGAGAAATTCCGTAAGGAATTAGAGCTTCAAAAAGAGCTTCAAGAGTATAAGGATTGTATCAAA AACGCCAAAACAGAAGCTGAGAAAAACGAATGCTTGAAAGGCTTGTCTAAAGAAGCTATAGAAAGATTGAAACAACAAGC GCTAGATTGTTTGAAAAACGCTAAAACCGATGAAGAACGAAACGAGTGCTTGAAAAATATTCCCCAAGACTTGCAAAAAG AACTACTAGCTGATATGAGCGTCAAGGCTTACAAGGACTGCGTTTCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAGTGT GAGAAATTGCTCACGCCTGAAGCGAGAAAAAAGTTAGAACAACAGGTTCTAGATTGTTTGAAAAACGCTAAAACCGATGA AGAACGAAAAAAGTGTTTGAAAGATCTCCCTAAAGACTTACAAAGCGATATTTTAGCTAAAGAGAGCGTTAAAGCTTATA AAGATTGCGTATCTCAAGCCAAAACAGAAGCTGAGAAAAAAGAATGCGAGAAATTGCTCACCCCTGAAGCGAAAAAACTT TTAGAAGAAGAAGCCAAAGAGAGCGTTAAGGCTTACTTGGATTGCGTATCAAAAGCCAAAAACGAAGCTGAGAAAAAAGA ATGCGAGAAATTGCTCACCCCTGAAGCGAAAAAAAAGTTAGAAGAAGCTAAAAAGAGCGTTAAGGCTTACTTGGATTGCG TATCTCAAGCTAAAACTGAAGCTGAGAAACAAGAATGCGAGAAATTACTCACGCCTGAAGCGAAAAAACTTTTAGAGCAA CAAGCGCTAGATTGTTTGAAAAACGCTAAAACCGAAGCTGAGAAAAAAAGGTGTGTCAAAGATCTCCCTAAAGACTTGCA GAAAAAGGTTTTAGCCAAAGAGAGCGTTAGGGTTTATTTGGATTGCGTATCTCAAGCCAAAACTGAAGCTGAAAGAAAAG AATGCGAGAAATTGCTCACCCCTGAAGCGAGAAAGCTATTAGAAGAAGCTAAAAAAAGCGTTAAAGCTTATAAAGACTGC GTATCAAGAGCCAGGAATGAAAAAGAGAAAAAAGAATGTGAGAAATTACTCACCCCTGAAGCGAGGAAACTATTAGAAGA AGCTAAAAAAAGCGTTAAAGCTTATTTGGATTGCGTATCTCAAGCCAAAACTGAAGCTGAGAAAAAAGAATGCGAGAAAT TGCTCACGCCTGAAGCGAGGAAACTATTAGAAGAAGCTAAAAAAAGCGTTAAGCTATTTGGATTGCGTATCTCAGGCAAA CTGAGCGGAAAAAAAAGGCGAGAAATTGACTCACGCCCTGAAGCGAGGAAACTTTTAGAGAATCAAGCGCTAGATTGTTT GAAAAACGCTAAAACCGAAGCTGAGAAAAAAAGGTGTGTCAAAGATCTCCCTAAAGACTTGCAGAAAAAGGTTTTAGCTA AAGAGAGTGTTAGGGTTTATTTGGATTGCGTGTCAAAAGCCAAAACTGAAGCTGAGAAAAAAGAATGCGAGAAATTACTC ACGCCTGAAGCGAGAAAACTTTTAGAAGAAGCTAAAGAGAGTGTTAAGGCTTACAAAGACTGCGTATCAAGAGCTAGGAA TGAAAAAGAGAAACAAGAATGCGAGAAATTACTCACCCCTGAAGCGAAAAAACTATTAGAGCAAGAAGTTAAAAAGAGCG TTAAGGCTTATTTAGACTGCGTTTCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTACTCACCCCTGAA GCTAGGAAATTTTTAGAGAATCAAGCGCTAGATTGTTTGAAAAACGCTAAAACCGAAGCTGAGAAAAAAAGGTGTGTCAA AGATCTCCCTAAAGACTTGCAGAAAAAGGTTTTAGCTAAAGAGAGTGTTAAGGCTTATTTAGACTGCGTTTCAAGAGCTA GGAATGAAAAAGAGAAAAAAGAATGCGAGAAATTACTCACCCCTGAAGCGAAAAAACTATTAGAAGAAGCTAAAGAGAGC GTTAAGGCTTATTTGGATTGCGTATCAAGAGCTAGGAATGAAAAAGAGAAAAAAGAGTGTGAGAAATTGCTCACGCCTGA AGCGAGGAAACTATTAGAAGAAGCTAAAGAGAGCCTTAAAGCCTATAAAGACTGCCTCTCTCAAGCTAGAAATGAAACTG AAAGGAGAGCCTGCGAGAAATTACTCACCCCTGAAGCGAGAAAACTATTAGAGCAAGAAGTTAAAAAGAGCGTCAAGGCT TATTTAGACTGCGTTTCAAGAGCTAGGAATGAAAAAGAGAAACAAGAATGCGAGAAATTACTCACGCCTGAAGCGAGGAA ATTTTTAGAGAAAGAACTCCAACAAAAAGATAAAGCGATAAAAGATTGCTTGAAGAACGCCGATCCTAACGACAGAGCGG CTATCATGAAGTGTTTGGATGGTTTGAGCGATGAAGAGAAGCTCAAATACCTGCAAGAAGCCAGAGAAAAGGCTGTCTTG GATTGTTTGAAAACGGCTAGGACCGATGAAGAAAAAAGGAAATGCCAAAACCTTTATAGCGATTTGATCCAAGAAATCCA AAATAAAAAGGCACAGAACAAACAAAATCAATTGAGTAAAACAGAAAGGTTGCATCAAGCAAGCGAGTGCTTGGATAACT TAGATGACCCTACTGATCAAGAAGCCATAGAGCAATGTTTAGAGGGCTTGAGCGATAGCGAAAGGGCGCTAATTCTAGGA ATCAAACGACAAGCTGATGAAGTGGATCGGATTTATAGCGATCTAAGAAGCCGCAAAACCTTTGATAACATGGCGGCTAA AGGTTATCCATTGTTGCCAATGGATTTTAAAAATGGTGGCGATATTGCCACTATTAACGCCACTAATGTTGATGCGGACA AAATAGCTAGCGATAATCCTATTTATGCTTCCATAGAGCCTGATATTACTAAGCAATACGAAACAGAGAAAACCATTAAG GATAAGAGTTTAGAAGCTAAATTAGCTAAGGCTTTAGGTGGCGATAAAAAAGATGACGATAAAGAAAAAAGTAAAAAACC CACAACAGAAACTAAAGCAGAAAGCAATAAGATAGACAAAGATGTCGCAGAAACTGCCAAAAATATCAGCGAAATCGCTC TTAAGAACAAAAAAGAAAAGAGTGGGGATTTTGTAGATGAAAATGGTAATCCCATTGACGATAAAAAGAAAGAAGAAAAA CAAGATGAAACAAGCCCTGTCAAACAGGCCTTTATAGGCAAGAGTGATCCCACATTTGTTTTAGCACAATACACCCCCAT TGAAATCACTCTGACTTCTAAAGTAGATGCCACCCTCACGGGTATAGTGAGTGGGGTTGTAGCCAAAGATGTATGGAACA TGAACGGCACTATGATCTTATTAGACAAAGGCACTAAGGTGTATGGGAATTATCAAAGCGTGAAAGGTGGCACGCCTATT ATGACTCGCTTAATGATAGTCTTTACTAAAGCCATTACGCCTGATGGGGTGATTATACCTCTAGCAAACGCTCAAGCAGC AGGCATGCTAGGTGAAGCAGGGGTAGATGGCTATGTGAATAATCACTTCATGAAGCGCATAGGCTTTGCTGTGATAGCAA GCGTGGTTAATAGCTTCTTGCAAACCGCGCCTATCATAGCATTAGATAAACTCATAGGTCTTGGCAAAGGCAGAAGTGAA AGGACACCTGAATTTAATTACGCTTTGGGTCAAGCTATCAATGGCAGTATGCAAAGTTCAGCTCAGATGTCTAATCAAAT TCTAGGGCAACTGATGAATATCCCCCCAAGTTTTTACAAAAACGAGGGCGATAGTATTAAGATTCTCACAATGGACGATA TTGATTTTAGTGGCGTGTATGATGTTAAAATTACCAACAAATCTGTGGTAGATGAAATCATCAAACAAAGCACCAAAACT TTGTCTAGAGAACATGAAGAAATCACCACAAGCCCCAAAGGTGGCAATTGA Protein sequence : MNEENDKLETSKKAQQDSPQDLSNEEATEANHFEDPLKEESSDNHLDNSTETKTQETKTHFDEDKLEETQTQMDSGGNET SESSNGSLADKLFKKARKLVDDKRPFTQQKSLDEEAQKLNKEDDQENNGYQEETQTDLIDDETSKKAQQDSPQDLSNEEA TEANHFEDLLKESKESSDNHLDNPTETKTHFDKDKLEETQTQIDSGGNETSESSNGSLADKLFKKARKLVDDKRPFTQQK SLDEEAQKLNKEDDQENNGYQEETQTDLIDDETSKKTQQHSPQDLSNEEATEVNHFEDSLKEESSDNHLDNPTETKTNFD GDKSEEITNDSNDQEIIKGSKKKYIIGGIVVAVLIVIILFSRSIFHYFVPLEDKSSRFSKDRNLYVNDEIQIRQEYNRLL KERNEKGNMIDKNLFFNDDPNRTLYNYLNIAEIEDKNPLRAFYECISNGGNYEECLKLIKDKKLQDQMKKTLEAYNDCIK NAKTEEERIKCLDLIKDENLKKSLLNQQKVQVALDCLKNAKTDEERKECLKLINDPEIREKFRKELELQKELQEYKDCIK NAKTEAEKNECLKGLSKEAIERLKQQALDCLKNAKTDEERNECLKNIPQDLQKELLADMSVKAYKDCVSRARNEKEKKEC EKLLTPEARKKLEQQVLDCLKNAKTDEERKKCLKDLPKDLQSDILAKESVKAYKDCVSQAKTEAEKKECEKLLTPEAKKL LEEEAKESVKAYLDCVSKAKNEAEKKECEKLLTPEAKKKLEEAKKSVKAYLDCVSQAKTEAEKQECEKLLTPEAKKLLEQ QALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVRVYLDCVSQAKTEAERKECEKLLTPEARKLLEEAKKSVKAYKDC VSRARNEKEKKECEKLLTPEARKLLEEAKKSVKAYLDCVSQAKTEAEKKECEKLLTPEARKLLEEAKKSVKLFGLRISGK LSGKKRREIDSRPEARKLLENQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVRVYLDCVSKAKTEAEKKECEKLL TPEARKLLEEAKESVKAYKDCVSRARNEKEKQECEKLLTPEAKKLLEQEVKKSVKAYLDCVSRARNEKEKKECEKLLTPE ARKFLENQALDCLKNAKTEAEKKRCVKDLPKDLQKKVLAKESVKAYLDCVSRARNEKEKKECEKLLTPEAKKLLEEAKES VKAYLDCVSRARNEKEKKECEKLLTPEARKLLEEAKESLKAYKDCLSQARNETERRACEKLLTPEARKLLEQEVKKSVKA YLDCVSRARNEKEKQECEKLLTPEARKFLEKELQQKDKAIKDCLKNADPNDRAAIMKCLDGLSDEEKLKYLQEAREKAVL DCLKTARTDEEKRKCQNLYSDLIQEIQNKKAQNKQNQLSKTERLHQASECLDNLDDPTDQEAIEQCLEGLSDSERALILG IKRQADEVDRIYSDLRSRKTFDNMAAKGYPLLPMDFKNGGDIATINATNVDADKIASDNPIYASIEPDITKQYETEKTIK DKSLEAKLAKALGGDKKDDDKEKSKKPTTETKAESNKIDKDVAETAKNISEIALKNKKEKSGDFVDENGNPIDDKKKEEK QDETSPVKQAFIGKSDPTFVLAQYTPIEITLTSKVDATLTGIVSGVVAKDVWNMNGTMILLDKGTKVYGNYQSVKGGTPI MTRLMIVFTKAITPDGVIIPLANAQAAGMLGEAGVDGYVNNHFMKRIGFAVIASVVNSFLQTAPIIALDKLIGLGKGRSE RTPEFNYALGQAINGSMQSSAQMSNQILGQLMNIPPSFYKNEGDSIKILTMDDIDFSGVYDVKITNKSVVDEIIKQSTKT LSREHEEITTSPKGGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cag-Y | AAF80198.1 | Cag-Y | Virulence | cag PAI | Protein | 0.0 | 91 |
| HP0527 | BAD13888.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 89 |
| orf13/14 | NP_223194.1 | cag island protein | Virulence | cag PAI | Protein | 0.0 | 89 |
| HP0527 | BAD14052.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 88 |
| HP0527 | NP_207323.1 | cag pathogenicity island protein (cag7) | Virulence | cag PAI | Protein | 0.0 | 88 |
| HP0527 | BAD13833.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 88 |
| cagY | YP_005777271.1 | cag pathogenicity island protein Y VirB10-like protein | Virulence | cag PAI | Protein | 0.0 | 88 |
| HP0527 | BAD13970.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 88 |
| cagY | AGC69792.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 88 |
| HP0527 | BAD13998.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 87 |
| HP0527 | BAD14026.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 87 |
| cagY | YP_005774542.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 86 |
| cagY | AGC69789.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 86 |
| cagY | AGC69786.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 85 |
| HP0527 | BAD13915.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 84 |
| cagY | YP_005775730.1 | cag pathogenicity island protein Y VirB10-like protein | Virulence | cag PAI | Protein | 0.0 | 84 |
| HP0527 | BAD13860.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 83 |
| cagY | AGC69787.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 81 |
| cagY | AGC69785.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 80 |
| cagY | AGC69788.1 | cag pathogenicity island protein Y | Virulence | cag PAI | Protein | 0.0 | 80 |
| HP0527 | BAD13806.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 79 |
| HP0527 | BAD13779.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 0.0 | 76 |
| cagY | YP_005779063.1 | cag island protein | Virulence | cag PAI | Protein | 0.0 | 76 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPELS_03975 | YP_005424915.1 | cag pathogenicity island protein (cag7) | VFG0287 | Protein | 0.0 | 88 |
