Gene Information

Name : HPELS_00945 (HPELS_00945)
Accession : YP_005424342.1
Strain : Helicobacter pylori ELS37
Genome accession: NC_017063
Putative virulence/resistance : Unknown
Product : IS200 insertion sequence from SARA17
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 190021 - 190437 bp
Length : 417 bp
Strand : +
Note : COG1943 Transposase and inactivated derivatives

DNA sequence :
ATGAAAAAAATTGATGATATGAGACACGGAAGACATTGTGTTTTTTTAATGCATGTGCATTTGGTATTTGTTACTAAATA
CAGGCGTTCAGCGTTCAACAAGGAAGTGATAGATTTTTTAGGATCGGTGTTTGCCAAAGTGTGTAAGGACTTTGAGAGCG
AATTGGTAGAATTTGATGGGGAGAGCGATCATGTGTATTTGCTTATCAACTACCCTCCAAAAGTGAGCGTGAGTAAGTTA
GTTAATTCTTTAAAAGGCGTTAGCAGTCGTTTGACTAGACAACACCATTTCAAAAGCGTTGAAGCTAGTTTGTGGGGGAA
GCATTTATGGTCGCCTAGTTATTTCGCTGGGAGTTGTGGGGGTGCACCTTTAGAGATGATTAAGCAATACATACAAGAAC
AAGAAACACCGCATTAA

Protein sequence :
MKKIDDMRHGRHCVFLMHVHLVFVTKYRRSAFNKEVIDFLGSVFAKVCKDFESELVEFDGESDHVYLLINYPPKVSVSKL
VNSLKGVSSRLTRQHHFKSVEASLWGKHLWSPSYFAGSCGGAPLEMIKQYIQEQETPH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA AAR03856.1 transposase A-like protien Not tested cag PAI Protein 6e-62 98
tnpB CAJ31328.1 insertion sequence IS606 transposase homolog B Not tested cag PAI Protein 2e-60 97