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Name : HPELS_08160 (HPELS_08160) Accession : YP_005425713.1 Strain : Helicobacter pylori ELS37 Genome accession: NC_017063 Putative virulence/resistance : Unknown Product : outer membrane protein Function : - COG functional category : - COG ID : - EC number : - Position : 1644691 - 1645506 bp Length : 816 bp Strand : + Note : COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen DNA sequence : ATGAATGCATTCAAGCGTATTATTAGTGTGGGGGTAATTGCTTTAGGTTTGTTTAACCTTTTAGACGCCAAACACCACAA AGAAAAAAAAGAAAACCACAAAATCACTCGTGAGCTTAAAGTGGGCGCTAACCCTGTGCCGCATGCGCAAATCTTGCAAT CAGTCGTGGACGATTTGAAAGAGAAAGGGATCAAATTAGTGATCGTGTCTTTTACCGATTATGTGTTGCCTAATTTAGCA CTCAATGACGGCTCTTTGGATGCGAATTACTTCCAACACCGCCCTTATTTGGATCGGTTTAATTTGGACAGAAAAATGCA CCTTGTTGGTTTGGCCAATATCCATGTGGAGCCTTTAAGATTTTATTCTCAAAAAATCACAGACATTAAAAACCTTAAAA AAGGCTCAGTGATTGCTGTACCAAATGATCCGGCCAATCAAGGCAGGGCGTTGATTTTACTCCATAAACAAGGCCTTATC GCTCTCAAAGACCCAAGCAATCTATACGCTACGGAGTTTGATATTGTCAAAAATCCTTACAATATCAAAATCAAGCCTTT AGAAGCCGCACTATTGCCTAAAGTTTTAGGGGATGTGGATGGGGCTATTGTAACAGGGAATTATGCCTTGCAAGCAAAAC TCACCGGAGCCTTATTTTCAGAAGACAAGGACTCGCCTTATGCCAATCTAATAGCCGCTCGTGAGGATAACGCGCAAGAT GAAGCCATAAAAGCGCTGATTGAAGCCTTACAAAGTGAAAAGACCAGGAAATTTATTTTGGATACCTATAAGGGGGCGAT TATCCCGGCTTTTTAA Protein sequence : MNAFKRIISVGVIALGLFNLLDAKHHKEKKENHKITRELKVGANPVPHAQILQSVVDDLKEKGIKLVIVSFTDYVLPNLA LNDGSLDANYFQHRPYLDRFNLDRKMHLVGLANIHVEPLRFYSQKITDIKNLKKGSVIAVPNDPANQGRALILLHKQGLI ALKDPSNLYATEFDIVKNPYNIKIKPLEAALLPKVLGDVDGAIVTGNYALQAKLTGALFSEDKDSPYANLIAAREDNAQD EAIKALIEALQSEKTRKFILDTYKGAIIPAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 5e-35 | 41 |
