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Name : HPELS_07630 (HPELS_07630) Accession : YP_005425613.1 Strain : Helicobacter pylori ELS37 Genome accession: NC_017063 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 1528458 - 1529705 bp Length : 1248 bp Strand : - Note : COG0172 Seryl-tRNA synthetase DNA sequence : ATGATTGATAGAAAACTTTTATTGCAAGATTTTGACAAGGTGGCTCTTTCTTTAAAAAAGCGTAACCATGCGATGGATGA TGAATTAGAGCGTTTGCGCGAAGTCATCACGCATTATAAAAAGCAACTCATTGAATTAGAAGGCTTGCAAGCCTTTCAAA ACAAGGTTTCTAAAGAATTTGGTATTAAAATGGCTCAAAAAGCGGATACAAGCGATCTCAAAAAAGAGCTAGAAAACAAT AAAATCAAATTGAATGAGCTTTCCAAAAGCGTGGGCGAATTGGAGCAACAAATTGATTTAAAGCTTTCCATAATCCCTAA TTTAGTGGATGAAAAAACCCCTTTAGGCGCGAATGAAGAAGACAACATAGAAATTAAAAAAATCCTAACCCCAAGAAATT TTACTTTCAAACCTAAAGAGCATTTTGAACTCGCCCAAAAAAACGGCTGGATTGATTTTGAAAGCGGCGTGAAACTCGCC AAAAGCCGCTTTTCTGTCATTAGGGGTTTTGGGGCGAAAATTTATCGCGCGCTCATTCATTTAATGCTGGATTTTAATGA AAAAAATGGCTTTGAAATCATCTACACGCCGGCGTTAGTGAATGAAAAAATGCTTTTTGGGACCGGGCAATTACCCAAAT TCAAAGAAGACGTTTTCAAAATAGAAAATGAAAATTTGTATCTGATCCCCACCGCTGAAGTAACGCTCACCAATTTATAC AACGACACCATTATCAGCGTTGAAAACCTCCCCATTAAAATGACCGCGCACACGCCTTGTTTTAGGAGCGAAGCAGGGAG CGCGGGCAAGGATACAAGGGGGATGATAAGACAACACCAGTTTGATAAAGTAGAGCTAGTGGCTATCACGCACCCTAAAG AAAGCGATGCGATGCAAGAGTGCATGCTAGAGAGCGCGAGCGAGATTTTAAAGGCTTTGGAATTACCGCACCGGTTCGTG CAATTGTGCAGCGCGGATTTAGGCTTTAGCGCGAGCAACACGATAGATATTGAAGTGTGGCTGCCCGGGCAAAATTGCTA CCGAGAAATCAGCTCCGTGTCTAACACGAGGGATTTTCAAGCCAGGCGCGCCAAAATCCGCTTCAAAGAAAATCAAAAAA ACCAGTTAGCGCACACCTTAAACGGCTCTTCTTTAGCGGTAGGCAGGACGATGGTCGCTTTAATGGAAAACCACCAGCAA GCGGATGGGAGCATCCATATTCCTAAGGCGTTAGAAAAATACCTTTAA Protein sequence : MIDRKLLLQDFDKVALSLKKRNHAMDDELERLREVITHYKKQLIELEGLQAFQNKVSKEFGIKMAQKADTSDLKKELENN KIKLNELSKSVGELEQQIDLKLSIIPNLVDEKTPLGANEEDNIEIKKILTPRNFTFKPKEHFELAQKNGWIDFESGVKLA KSRFSVIRGFGAKIYRALIHLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLTNLY NDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDAMQECMLESASEILKALELPHRFV QLCSADLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQ ADGSIHIPKALEKYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-77 | 46 |
