Gene Information

Name : lysS (BANAU_0081)
Accession : YP_005419419.1
Strain : Bacillus amyloliquefaciens YAU B9601-Y2
Genome accession: NC_017061
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase LysS
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 89700 - 91199 bp
Length : 1500 bp
Strand : +
Note : -

DNA sequence :
ATGAGTCAAGAAGAGCAAAATCATGAGGAATTGAACGACCAGCTGCAAGTCAGACGAGATAAAATGAACCAGCTGAGAGA
AAACGGCATTGACCCTTTCGGCGAACGTTTCGAGAGAACGCATCAATCTCAACAGATCATTGACGCCTACCAGGAGCTTT
CTAAAGAAGAACTGGAAGAAAAAGCGATCGAAGTGACCATTGCAGGCCGTATGATGACAAAGCGCGGAAAAGGGAAAGCC
GGCTTTGCGCATCTGCAGGACTTAGAAGGTCAAATTCAAATTTACGTAAGAAAAGACAGTGTCGGCGAAGAACAATATGA
AATCTTTAAATCTTCAGACCTCGGAGACGTTATCGGCATCACGGGGAAAGTTTTCAAAACAAACGTAGGCGAGCTTTCTG
TCAAAGCGACATCTTTTGAACTGCTGACAAAAGCACTGCGTCCTCTTCCTGATAAATATCATGGGTTAAAAGATGTTGAA
CAGCGTTACCGCCAGCGCTATCTCGATCTCATCGTAAACCCTGACAGCAAACAAACGTTTATCACACGCAGCAAAATCAT
CCAAGCGATGAGAAGATACTTAGATGACCATGGATACTTAGAAGTTGAAACACCTACGATGCACAGCATACCGGGAGGAG
CGTCTGCACGCCCGTTCATCACGCACCATAACGCGCTCGATATGCCTCTTTATATGCGTATTGCGATTGAACTGCACCTG
AAACGCCTGATTGTCGGCGGATTGGAAAAAGTCTACGAAATCGGCCGTGTGTTCCGTAACGAAGGTGTTTCTACACGCCA
TAACCCTGAATTCACGATGATCGAGCTGTATGAAGCGTACGCCGATTATAAAGATATTATGAGCCTTACGGAAAACCTCG
TTGCACATATTGCGCAGGAAGTGCTTGGAAGCACCACAATCCAGTACGGCGAAGAGCAGATTGATCTGAAACCTGAATGG
AAACGACTCCACATGGTAGATGCGGTCAAAGAAGCGACAGGCGTAGATTTCTGGAATGAGATGACTGTTGAAGAAGCGCG
CGGTCATGCAAAAGAGCATGGTATCGAGATCACAAACTCAATGACGGTGGGTCATATCATCAATGAATTCTTCGAACAAA
AAATTGAAGAAACACTCATTCAGCCTACATTTATTTACGGCCACCCTGTAGAGATTTCTCCTCTTGCTAAGAAAAATCCG
GAGGACCCTCGCTTTACAGACCGTTTTGAGCTGTTTATCGTCGGCCGTGAGCACGCTAATGCGTTTACGGAGCTGAATGA
CCCTATTGACCAGAGGGAACGCTTTGAAGCGCAATTAAAAGAAAGAGAAGAAGGAAACGATGAAGCGCATATGATGGATG
AAGACTTCGTTGAAGCTCTTGAATACGGCATGCCGCCGACCGGGGGATTGGGTATCGGTATCGACCGCCTTGTCATGCTG
TTAACAAATGCTCCGTCTATCAGAGACGTTTTATTATTCCCTCAAATGAGACAACGCTAA

Protein sequence :
MSQEEQNHEELNDQLQVRRDKMNQLRENGIDPFGERFERTHQSQQIIDAYQELSKEELEEKAIEVTIAGRMMTKRGKGKA
GFAHLQDLEGQIQIYVRKDSVGEEQYEIFKSSDLGDVIGITGKVFKTNVGELSVKATSFELLTKALRPLPDKYHGLKDVE
QRYRQRYLDLIVNPDSKQTFITRSKIIQAMRRYLDDHGYLEVETPTMHSIPGGASARPFITHHNALDMPLYMRIAIELHL
KRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMSLTENLVAHIAQEVLGSTTIQYGEEQIDLKPEW
KRLHMVDAVKEATGVDFWNEMTVEEARGHAKEHGIEITNSMTVGHIINEFFEQKIEETLIQPTFIYGHPVEISPLAKKNP
EDPRFTDRFELFIVGREHANAFTELNDPIDQRERFEAQLKEREEGNDEAHMMDEDFVEALEYGMPPTGGLGIGIDRLVML
LTNAPSIRDVLLFPQMRQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 9e-128 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_005419419.1 lysyl-tRNA synthetase LysS VFG1668 Protein 5e-128 53