Gene Information

Name : gabD (BANAU_0352)
Accession : YP_005419690.1
Strain : Bacillus amyloliquefaciens YAU B9601-Y2
Genome accession: NC_017061
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.16
Position : 398617 - 400005 bp
Length : 1389 bp
Strand : +
Note : -

DNA sequence :
ATGCCAGAACAATTAACAGTGTACAACCCGGCAACGGGAGAGGCGATCGAAAGCATCCCCCAGCAGACGGCCGAAGATGT
TGAAAAAGCGATTGAACGTTCACATCAAGCGTTTCAATCATGGTCCAAAACATCAGCGGGAGAACGTGCCTCACTTTTGA
GAAAATGGTATGAGCTGATTGTTGAAAATAAAGAAGAACTTGCGGAATTAATTACGAAAGAAAACGGCAAACCGTATGAA
GAAGCGGTCGGAGAAGTTTTATACGGCGCCGGTTATATTGAATGGTTCGCCGAAGAAGCAAAACGGATTTACGGCAGAAC
CGTACCTGCGCCGACAACGGGCAAACGGATTGTCGTCACCCGTCAGGCGGTCGGCCCGGTAGCCGCGATCACGCCGTGGA
ATTTCCCGAATGCGATGATTACAAGAAAAGCCGCGCCCGCTTTGGCGGCAGGCTGTACGTTCATCATCAAACCGGCGGAG
GATACGCCGCTTTCCGCTTACGCCCTTGCGCGTCTCGCATATGAAGCGGGAATTCCGAAGGACGTGCTGCAAGTGGTGAT
CGGTGACGGAGCCGAAATCGGAAACGTCTTCACCAGCAGCCCGAAAATCCGTAAAATTACTTTTACCGGCTCAACGCCTG
TCGGCAAAATCCTGATGAAAAACAGCGCCGACACCGTAAAACATATGTCAATGGAGCTTGGCGGACATGCGCCGCTGATC
GTGGATGAAGACGCTGATCTTGATCTGGCGGTAGCCCAAACAATGGCCTCTAAATTCAGAAATGCCGGCCAAACCTGCGT
CTGTGCGAACCGGCTGATCGTACACGAATCCGTAAAAGACGAGTTTGCGAAAAAACTGAGTGAAGAAGCTGCGAAACTCA
AAGTCGGAAACGGTCTTGAAAAAGGCGTAAACGTCGGCCCTGTCATCAACAAAAAAGGCTTCGATAAAATCGTCGGCCAA
ATTAATGACGCCGTGGAAAAAGGCGCAAAAGTGCTGACGGGCGGAACGTATGACCAAAACGATGAAAAAGGATGCTATTT
CGTGACGCCGACCGTGCTTTCAGATGTAGATACATCCATGAACATCATGCATGAAGAAACATTCGGCCCGGTTGCGCCGA
TCGTTACGTTCTCAGATATTGATGAAGCGATCAAGCTTGCGAACGATACGCCGTTCGGGCTTGCGGCTTATTTCTTCACA
GAAAACTACCGCCGCGGCATTTATATTTCTGAACAGCTTGAATACGGCATCATCGGCTGGAATGACGGCGGTCCGTCCGC
GGTTCAAGCGCCGTTCGGAGGAATGAAAGAAAGCGGCATCGGCCGTGAAGGCGGTACGGAAGGCATTGAACCGTACCTGG
AAACCAAATACATGTCTATCGGACTTTAA

Protein sequence :
MPEQLTVYNPATGEAIESIPQQTAEDVEKAIERSHQAFQSWSKTSAGERASLLRKWYELIVENKEELAELITKENGKPYE
EAVGEVLYGAGYIEWFAEEAKRIYGRTVPAPTTGKRIVVTRQAVGPVAAITPWNFPNAMITRKAAPALAAGCTFIIKPAE
DTPLSAYALARLAYEAGIPKDVLQVVIGDGAEIGNVFTSSPKIRKITFTGSTPVGKILMKNSADTVKHMSMELGGHAPLI
VDEDADLDLAVAQTMASKFRNAGQTCVCANRLIVHESVKDEFAKKLSEEAAKLKVGNGLEKGVNVGPVINKKGFDKIVGQ
INDAVEKGAKVLTGGTYDQNDEKGCYFVTPTVLSDVDTSMNIMHEETFGPVAPIVTFSDIDEAIKLANDTPFGLAAYFFT
ENYRRGIYISEQLEYGIIGWNDGGPSAVQAPFGGMKESGIGREGGTEGIEPYLETKYMSIGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 2e-101 54
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 4e-71 43