Gene Information

Name : ycdG (BANAU_0252)
Accession : YP_005419590.1
Strain : Bacillus amyloliquefaciens YAU B9601-Y2
Genome accession: NC_017061
Putative virulence/resistance : Unknown
Product : putative glycosidase
Function : -
COG functional category : -
COG ID : -
EC number : 3.2.1.10
Position : 279766 - 281445 bp
Length : 1680 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAGTGACTGGTGGAAAGACGCCGTTGTCTATCAAATCTATCCGCGAAGCTTTCAAGATACGAACGGCGACGGCAT
AGGCGACCTGCGGGGGATTATCGCGCGTCTCGATTATATAAAAGAACTTGGCGCTGATGTGATATGGATCTGCCCGATTT
ACCCGTCGCCAAACGTTGATAACGGCTACGATGTGACGGATCATCAAGCGATTATGGAATCCTACGGAACGATGGAGGAC
TTTCACAATCTGCTTACAGAATGCCGCAGCCGCGGATTAAAGCTTGTGATGGACTTCGTCTTAAATCATACATCCACGGA
GCATCCTTGGTTCAAAGAGGCGGAAATGAATCCGGACAGCAAATACCGCGATTATTATATTTGGCGGCCGGGCACCGCGG
ACGGCCCGCCGACCGATTGGGTGTCGGATTACGGACAATCCGTCTGGCAGTACGAAGAACATACGGGCGAATATTACCTG
CATATGAACGCCGTCAAACAAGCCGATCTGAATTGGGAAAATCCCGAGGTTCGGCAATCAGTATACGAGATGATGAGATT
TTGGCTCGATAAAGGCGTGGACGGATTGCGAATAGACCAGCTTCATCTTCTGTCAAAAAAAGAATATTTGCCGCCATATG
AAGATTACATCGCCCGCCGGGCCGATCCGAAGCCTTTCCGGCCAAACGGGGCACGGATACATGATTACTTAAAAGAAATG
ACGAAAGAGGTATTTTCCAAATATGACGTGATGTCAGTCGGCGAGGCCGGATCAGTGACGCCTGAGGAAGGGCTCGTCTA
CACGGGAACCGATGAGCATGAACTGAATATGATTTTTCATTTTCAGCATATGAAGCTTGATCAAAAGCCGGGCCAAGAGC
ATTGGGATGTAAAACCGCTTGAGCTGTCCGATTTAAAGAAAGTGCTCACAGACTGGCAGGAAAAACTGGAACATCAAGGC
TGGAATACGCTGTATTGGTGCAATCATGACCAGCCCCGGATCGTATCCCGTTTCGGAGACGAAAGCACATACCGCAAAGC
ATCCGCCAAAATGCTTGCCGCCCTGCTTTATTTCATGAAAGGCACGCCGTACATTTACCAGGGAGAAGAAATCGGCATGA
CAAACGCTCCGTTTGACAGAATAGAGGATTATCAAGATATTCAGACCGTCAATATGTATCATAAAAGGGTATTTGAAATG
GGCCGCAACAGAGAAGAAGTCATGGCGTCCATTATGGCGAAAAGCCGGGACCATGCCCGTACACCGATGCAGTGGGACGG
CAGCAAGAATGCCGGATTTACGGAGGGCGAACCGTGGCTGAAGGTCAATCCCAATTACAAAACCGTCAATGCGGCCGAGG
CTCAGGATGATCCCGATTCTATATTGAACTTTTACAAAAAACTGATCCGCCTGAGAAAACAGTATGCTGATATCATAAAA
GGCAGCTACACGCTGCTGCTTCCTGATGACCCGCAGCTGTTTGTATATGAAAGACAGGCAAACGGACAAAAACTCATGTC
CATCAGCAACGTATCGAAAGAAGAAGCCGCCTTTTATTGGCCGGACGGCTCCGAACCTGAAAGGGCCGAGCTGCTTCTCA
GCAACTATGAAAATGACGGCGGCACGGAATCCCGCATCACATTCCGCCCATACGAAACAAGAGTTTATCTGCTTGCCTGA

Protein sequence :
MASDWWKDAVVYQIYPRSFQDTNGDGIGDLRGIIARLDYIKELGADVIWICPIYPSPNVDNGYDVTDHQAIMESYGTMED
FHNLLTECRSRGLKLVMDFVLNHTSTEHPWFKEAEMNPDSKYRDYYIWRPGTADGPPTDWVSDYGQSVWQYEEHTGEYYL
HMNAVKQADLNWENPEVRQSVYEMMRFWLDKGVDGLRIDQLHLLSKKEYLPPYEDYIARRADPKPFRPNGARIHDYLKEM
TKEVFSKYDVMSVGEAGSVTPEEGLVYTGTDEHELNMIFHFQHMKLDQKPGQEHWDVKPLELSDLKKVLTDWQEKLEHQG
WNTLYWCNHDQPRIVSRFGDESTYRKASAKMLAALLYFMKGTPYIYQGEEIGMTNAPFDRIEDYQDIQTVNMYHKRVFEM
GRNREEVMASIMAKSRDHARTPMQWDGSKNAGFTEGEPWLKVNPNYKTVNAAEAQDDPDSILNFYKKLIRLRKQYADIIK
GSYTLLLPDDPQLFVYERQANGQKLMSISNVSKEEAAFYWPDGSEPERAELLLSNYENDGGTESRITFRPYETRVYLLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 8e-140 50