Gene Information

Name : pdhD (BANAU_1382)
Accession : YP_005420719.1
Strain : Bacillus amyloliquefaciens YAU B9601-Y2
Genome accession: NC_017061
Putative virulence/resistance : Unknown
Product : dihydrolipoamide dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.8.1.4
Position : 1474663 - 1476075 bp
Length : 1413 bp
Strand : +
Note : -

DNA sequence :
ATGGTAGTAGGAGATTTCCCTATTGAAACAGATACTCTTGTGATTGGTGCGGGACCTGGCGGCTATGTAGCTGCCATCCG
CGCTGCTCAGCTTGGACAAAAAGTAACAGTCGTTGAAAAAGCAACTCTTGGAGGCGTTTGTCTGAACGTCGGCTGTATTC
CTTCAAAAGCGCTCATCAATGCAGGCCATCGTTACGAGAATGCAAAACATTCAGATGACATGGGAATCACTGCTGAGAAC
GTAACGGTTGACTTTACAAAAGTCCAAGAATGGAAAGCTTCTGTTGTAAATAAGCTTACCGGCGGTGTTGCAGGTCTTTT
AAAAGGAAATAAAGTGGACGTTATAAAAGGGGAAGCTTATTTCGTAGACAGCAACTCTGTCCGCGTAATGGATGAGAACT
CTGCGCAAACATACACATTTAAAAACGCAATCATTGCTACCGGTTCTCGCCCTATCGAATTGCCAAACTTCAAATATAGC
GAACGCGTTCTGAACTCTACAGGCGCACTTGCGCTTAAAGAAATTCCGAAAAAGCTCGTTGTTATCGGCGGCGGATATAT
CGGTACTGAGCTTGGAACAGCGTATGCGAACTTCGGAACTGAATTGGTTATTTTAGAAGGCGGAGATGAAATTCTTCCTG
GCTTCGAAAAACAAATGAGTTCTCTCGTTACCCGCAGACTGAAGAAAAAAGGCAACGTTGAAATCCATACAAGCGCTATG
GCTAAAGGCGTTGAAGAAAGACCTGACGGCGTAACAGTTACATTCGAAGTAAAAGGCGAAGAAAAAACGGTTGATGCTGA
TTACGTATTAATCACTGTCGGACGCCGTCCGAACACTGATGAGCTCGGCCTTGAGCAAGTCGGTATCGAAATGACTGACC
GCGGTGTCATTAAAACAGACAAGCAGTGCCGCACAAACGTACCGAACATTTACGCAATCGGTGACATCATTGACGGACCT
CCATTGGCTCACAAAGCGTCTTACGAAGGTAAAATCGCTGCGGAAGCTATTTCAGGAGAGCCGGCTGAAATCGATTACCT
CGGTATTCCGGCGGTTGTATTCTCTGAGCCTGAACTGGCTTCTGTCGGTTACACTGAAGCACAGGCGAAAGAAGAAGGCA
TTGAAGTCGTTGCAGCTAAGTTCCCGTTTGCAGCAAACGGACGTGCGCTGTCTCTTAACGAAACTGACGGCTTCATGAAG
CTGATCACTCGTAAAGAAGACGGTCTTGTAATCGGTGCGCAAATTGCCGGCGCAAGCGCTTCTGACATGATTTCTGAATT
GAGCCTGGCGATCGAAGGCGGAATGACTGCTGAAGATATCGCAATGACAATTCACGCTCACCCGACATTGGGCGAAATCA
CTATGGAAGCTGCCGAAGTAGCAATCGGAAGCCCGATCCATATCGTAAAATAA

Protein sequence :
MVVGDFPIETDTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALINAGHRYENAKHSDDMGITAEN
VTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVIKGEAYFVDSNSVRVMDENSAQTYTFKNAIIATGSRPIELPNFKYS
ERVLNSTGALALKEIPKKLVVIGGGYIGTELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAM
AKGVEERPDGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTDKQCRTNVPNIYAIGDIIDGP
PLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELASVGYTEAQAKEEGIEVVAAKFPFAANGRALSLNETDGFMK
LITRKEDGLVIGAQIAGASASDMISELSLAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0077 NP_763632.1 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 Not tested SCCpbp4 Protein 5e-114 51