Gene Information

Name : Q7S_24031 (Q7S_24031)
Accession : YP_005419064.1
Strain :
Genome accession: NC_017060
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 260310 - 261041 bp
Length : 732 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGGAGATGAAAATGATGGAATCACTGGTAGAACTCACTGACGTGAATAAGATTTTTTTGACCGATGAAATTGAGACACA
CGCCCTGAGCAAGATCACGCTCAGCATTTCCAAAGGGGAATACGTGGCGATTTCCGGGCCTTCAGGCTGTGGTAAATCAA
CGCTGCTTTCGATTTTGGGTCTGCTCGATGTGGCCTCTACCGGGACCTATCAGCTGGCCGGGCACAACGTGGAAAATATC
TCTAAAAAGCAGCGTGCCCTGGTGAGAAATCGTGATATCGGCTTTATCTTTCAGTCATTTAATCTCATCAGCGATTTAAC
CATTGAGGAAAATGTCTCCCTGCCACTGACTTACCGCAAGGATATTTCTAAAACTGAACGGCAGCAGAGAGTGGCGGAAG
CCTTAGACAAGGTCAATATGTCCCACCGGGGACGCCATTATCCCTCGCAGCTTTCCGGCGGACAGCAGCAGCGCGTGGCC
GTCGCACGGGCTATCGTGGGCAATCCCTCCATCATTCTGGCGGATGAACCGACCGGTAACCTGGACTCCCACAATGCCGA
GGCGGTGCTGAATATTCTCGATAAGTTACATCAGGAGGGCGCCACGATCTGCATCGTCACCCATGATCCTCGTTCAGCCG
AGCGGGCGCAGCGCAGCATCGTGCTTTCTGACGGGCAGGTCGTCGGAGACGGACATGTGGCACGGGAACTGACCCTGATA
AAGGAAGCATAA

Protein sequence : 
MEMKMMESLVELTDVNKIFLTDEIETHALSKITLSISKGEYVAISGPSGCGKSTLLSILGLLDVASTGTYQLAGHNVENI
SKKQRALVRNRDIGFIFQSFNLISDLTIEENVSLPLTYRKDISKTERQQRVAEALDKVNMSHRGRHYPSQLSGGQQQRVA
VARAIVGNPSIILADEPTGNLDSHNAEAVLNILDKLHQEGATICIVTHDPRSAERAQRSIVLSDGQVVGDGHVARELTLI
KEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_24031 YP_005419064.1 ABC transporter NC_012469.1.7686878. Protein 1e-50 47
Q7S_24031 YP_005419064.1 ABC transporter NC_008702.1.4606598. Protein 5e-46 47
Q7S_24031 YP_005419064.1 ABC transporter NC_012469.1.7686946. Protein 4e-32 43
Q7S_24031 YP_005419064.1 ABC transporter CP001581.1.gene798.p Protein 2e-38 43
Q7S_24031 YP_005419064.1 ABC transporter NC_012469.1.7685735. Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_24031 YP_005419064.1 ABC transporter VFG0869 Protein 9e-25 41