|
Name : Q7S_23366 (Q7S_23366) Accession : YP_005418935.1 Strain : Genome accession: NC_017060 Putative virulence/resistance : Virulence Product : type VI secretion ATPase, ClpV1 family protein Function : - COG functional category : - COG ID : - EC number : - Position : 127843 - 130497 bp Length : 2655 bp Strand : + Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGGAACATCAGTCAGCTGTCTTACTTCGCCGCTTAAATCCGTACTGCGCGAAAGCGCTGGAAGCCGCCGCGACGCTCTG CCAGACCCGCGCCCACAATGAAATTACCGTCGAGCACTGGTTGCTCAAACTGCTGGAACTGGGCGAAGGCGACATCACCG TGCTGGCCCGCCGCTATGAATGGGATATGGATGCGCTGTGGCAAAGCCTGCTGGCACATCTCGATGCCCTGCCGCGTTCC GTGCATTCGCGTCCGCAGCTTTCCCAAGATTTACAATCGCTGATGAAAGCGGGCTGGCTGGCCGCATCGCTGCAGGATGA CAACCAGAGCATCCGCAGTGTCAATCTGCTGGAAGCGCTGATGGCGCAACCACGCCTGTTGCGCTGCGAAGGTTTATGGC CGCTGTTCAGCCTGAGCGAAGAACATATCCGTCGCCTCAAGCCCGTGCTGGATGCCTTGTCCGAAGAGCGCCCGGAGCTG CAACGACAGGAAAGCCTTAGCCGCACGCCTTCCGCACTTTCTGAAAACTCAGCGACACAAAATGCAGAGTCTGGTGTTAC CGGCCAGTCGTTAAGCGAAGCATTGCAGGCCGCGCTCGATAAATTCACGCTGGATGTCACCGCGAAAGCTAAAGCCGGAC AGATTGATCCGGTGTTTGGTCGCGATAACGAGATCCGTCAGATGGTGGACATTCTGTCCCGTCGTCGCAAAAACAACCCG ATTTTAGTCGGTGAACCGGGCGTCGGTAAGACCGCGCTGGTGGAAGGTCTTGCACTGCGCATCAGTGAAGGCAACGTGCC GGACAGCCTGAAAACCGTCAGCCTGCGCACGCTGGATTTAGGTCTGCTACAGGCCGGTGCCGGAGTAAAAGGCGAGTTCG AGCAACGCCTGAAAAACGTCATCGACGCCGTGCAAAAATCACCCACACCGGTTCTGCTGTTTATCGATGAAGCGCACACT ATTATTGGCGCTGGCAATCAGGCCGGTGGCGCCGACGCTGCTAACCTGCTCAAACCCGCTCTCGCCCGTGGTGAATTGCG CACCATCGCCGCCACGACCTGGTCTGAGTACAAACAGTATTTTGAGCGCGATGCCGCCCTTGAGCGCCGCTTCCAGATTG TCAAAGTCGATGAGCCGGACGACGAGATGGCCTGCCTGATGCTGCGCGGCCTGAAATCCCGCTACGCGCAGCACCACGGC GTTCACATCACCGACGAAGCCGTCAAAGCCGCCGTCAGCCTTTCCCGCCGCTACATCACCGGCCGCCAGCTGCCGGACAA AGCCGTTGACCTGCTCGATACCGCGTCCGCCCGTGTACGCATGAGCCTCGATACCCTGCCGGAAGAGCTGACCCGCCTTA AGGCGCAGATAGCCGCACTGGGAATGGAGGAGCAGGCATTGCTGGAAGATATCGCGCTCGGCAGCCAGAGCCACGGCGAA CGTCTGGAGAAAATTGGCGAACTTGAGCGCGAACTCAATGCCCAGCTTTCCGCTCTCGAAGCGCAGTACGAAGCCGAAAA AGCCCTGACGCATAAGCTGCTGGAAATCCGTCAGGACATCAGCCGTCAGGAAGATATTCACGCGCTGCAACAAGAACTGG CTCAGTTGCAGGGCAGCGCCCCGCTGCTGTCTCTTGACGTGGACGTCCGCACCGTTGCGACAGTCATTGCCGACTGGACC GGCGTGCCGCTGACCAGCCTGCTGAAGGACGAACAGACTGACCTGTTGCAACTGGAAAACCATCTGGGCAAACGTGTCGT CGGACAGGATCATGCGCTGACCGACATGGCGCAACGCCTGCGTGCCGCCAAAACCGGCCTGACGTCTGAGAATGGCCCGC TGGGCGTCTTCCTGCTGGTCGGTCCGAGCGGTGTCGGTAAAACGGAAACCGCACTTTCCCTCGCGGACTGCCTGTTCGGC GGCGAGAAATCCCTTATCACCATTAACCTCAGCGAATACCAGGAAGCGCACACCGTATCCCAGCTGAAAGGCTCACCTCC GGGATACGTCGGTTACGGTCAGGGCGGTATTCTGACGGAAGCCGTGCGTAAACGACCGTACAGCGTCGTCCTGCTTGATG AAGTGGAAAAAGCCCACCGGGATGTCATTAACCTGTTCTATCAGGTATTCGACCGCGGCTTTATGCGAGATGGTGAAGGC CGCGAAATCGACTTCCGTAACACCGTCATTCTGATGACTGCGAATCTGGGCAGCGACCACATCATGCAGTTGCTGGATGA ACAGCCGGAAGCCACCGACAGCGATTTGCAGGAACTGCTGCGCCCGATCCTGCGCGATCATTTCCAGCCCGCCCTGCTCG CCCGTTTCCAGACGCTGATTTATCGTCCGCTGAATGCCGTTGCCCTGCGCACTATCGTTGAGATGAAACTGGCACAAGTC GCGAAACGTCGGAACAAGCACTATGGCCTGACCTGCTCCATAGAAGAAAGTCTGTACGACACGCTGGTCGCCGCCTGCCT GCTGCCGGACACCGGCGCCCGCAACATCGACAGCCTGCTCAATCAGCAGATACTGCCGGTGCTGAGCCAGCAACTGCTGC AGCGCATGGCCGGGCAACAGCCCACTACTGCGCTGGCGCTGGGCTGGGATGAAGACGAAGGGATCACGCTGGAATTTGAC GGAGAACAGAAATGA Protein sequence : MEHQSAVLLRRLNPYCAKALEAAATLCQTRAHNEITVEHWLLKLLELGEGDITVLARRYEWDMDALWQSLLAHLDALPRS VHSRPQLSQDLQSLMKAGWLAASLQDDNQSIRSVNLLEALMAQPRLLRCEGLWPLFSLSEEHIRRLKPVLDALSEERPEL QRQESLSRTPSALSENSATQNAESGVTGQSLSEALQAALDKFTLDVTAKAKAGQIDPVFGRDNEIRQMVDILSRRRKNNP ILVGEPGVGKTALVEGLALRISEGNVPDSLKTVSLRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQKSPTPVLLFIDEAHT IIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQIVKVDEPDDEMACLMLRGLKSRYAQHHG VHITDEAVKAAVSLSRRYITGRQLPDKAVDLLDTASARVRMSLDTLPEELTRLKAQIAALGMEEQALLEDIALGSQSHGE RLEKIGELERELNAQLSALEAQYEAEKALTHKLLEIRQDISRQEDIHALQQELAQLQGSAPLLSLDVDVRTVATVIADWT GVPLTSLLKDEQTDLLQLENHLGKRVVGQDHALTDMAQRLRAAKTGLTSENGPLGVFLLVGPSGVGKTETALSLADCLFG GEKSLITINLSEYQEAHTVSQLKGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHRDVINLFYQVFDRGFMRDGEG REIDFRNTVILMTANLGSDHIMQLLDEQPEATDSDLQELLRPILRDHFQPALLARFQTLIYRPLNAVALRTIVEMKLAQV AKRRNKHYGLTCSIEESLYDTLVAACLLPDTGARNIDSLLNQQILPVLSQQLLQRMAGQQPTTALALGWDEDEGITLEFD GEQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-154 | 45 |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-111 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Q7S_23366 | YP_005418935.1 | type VI secretion ATPase, ClpV1 family protein | VFG2076 | Protein | 1e-174 | 45 |
| Q7S_23366 | YP_005418935.1 | type VI secretion ATPase, ClpV1 family protein | VFG2084 | Protein | 2e-142 | 44 |
| Q7S_23366 | YP_005418935.1 | type VI secretion ATPase, ClpV1 family protein | VFG0079 | Protein | 2e-113 | 41 |
