Gene Information

Name : Q7S_23341 (Q7S_23341)
Accession : YP_005418930.1
Strain :
Genome accession: NC_017060
Putative virulence/resistance : Virulence
Product : type VI secretion protein EvpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 121895 - 123442 bp
Length : 1548 bp
Strand : +
Note : COG3517 Uncharacterized protein conserved in bacteria

DNA sequence :
ATGCTCATGTCAGTCAACACTGAAAACTCTTCTTCCAGCCAGACAACGGTTCTGGATCGCCCTGACGCCGGTACGGTATA
CGCTTCCCTGTTTGATAAAATCAACCTGACGCCTGTGTCCTCACTGGGTGATCTGAACGATTTTCAGGATACGTCTGCGC
TGGCCGATGTCACCGCTGATCAGCGTGTCACTGCCGCTGTACAGGTCTTCCTTGAGCGCCTGAAGCTGTCCGGTCAGACG
GTTGAACGTCTGGACAAAACCCTGCTCGATCATCATATCGCCGAACTCGACAGCCAGATCAGCCGTCAGTTGGATGTGGT
CATGCATCACCCGGAATTTCAGCGTATTGAATCCGGCTGGCGTGGTCTGAAGTTCCTGGTTGATCGTACTGATTTCCGCC
AGAACGTAAAAATTGAACTGCTGGATGTGTCTAAAGACGACCTCCGTCAGGACTTCGAAGATTGTCCTGAGATCATCCAG
AGCGGCCTGTACCGCCATACCTACATTCAGGAATATGACACTCCGGGCGGCGAGCCAATCGGTTCTGTGATTTCCAACTA
CGAGTTTGACGCGTCGGCGCAAGATGTCGCCCTGCTGCGTAACATTTCTAAAGTATCTGCCGCTGCGCATATGCCATTCG
TCGGTGCGGTCGGCCCTAAATTCTTCCTGAAAGATTCCATGGAAGAAGTGGCGGCGATTAAAGATATCGGCAACTACTTT
GACCGTGCGGAATACATCAAGTGGAAATCCTTCCGCGATTCTGACGATTCCCGCTATATCGGTCTGACCATGCCGCGCGT
ACTCGGTCGCCTGCCGTATGGTCCGGATACCGTTCCTGTTCGCAGCTTCAACTACGTTGAAGAAGTGAAAGGTCCGGATC
ACGAGAAATATCTGTGGACAAACGCGGCGTTCGCCTTTGCGGCCAACATGGTGAAAAGCTTCATCAAAAATGGCTGGTGT
GTGCAAATCCGTGGCCCACAGGCGGGCGGTGCAGTGACTGATCTGCCGATCCATCTGTACGATCTCGGCACCGGCAATCA
GGTGAAAATCCCGTCAGAAGTGATGATCCCGGAAACCCGCGAATTTGAATTTGCCAATCTGGGCTTTATCCCGCTGTCTT
ACTACAAAAACCGCGATTACTCCTGCTTCTTCTCCGCGAACTCTGCGCAGAAACCGGCGCTGTACGATACTGCCAATGCC
ACTGCAAACAGCCGCATCAATGCACGCCTGCCGTACATCTTCCTGCTTTCACGCATCGCACACTACCTGAAGCTGATTCA
GCGGGAAAATATCGGCACCACCAAAGACCGTCGTCTGCTGGAACTGGAACTGAACACCTGGATCCGTACGCTGGTCACTG
AAATGACTGACCCGGGCGACGACCTGCAAGCCTCTCACCCGCTGCGTGACGCCAAAGTGACCGTCGAAGATATCGAAGAC
AACCCGGGCTTCTTCCGCGTGAAACTGTACGCCGTACCGCACTTCCAGGTGGAAGGGATGGACGTGAATCTGTCACTGGT
TTCTCAGATGCCTAAAGCGAAAGCGTAA

Protein sequence :
MLMSVNTENSSSSQTTVLDRPDAGTVYASLFDKINLTPVSSLGDLNDFQDTSALADVTADQRVTAAVQVFLERLKLSGQT
VERLDKTLLDHHIAELDSQISRQLDVVMHHPEFQRIESGWRGLKFLVDRTDFRQNVKIELLDVSKDDLRQDFEDCPEIIQ
SGLYRHTYIQEYDTPGGEPIGSVISNYEFDASAQDVALLRNISKVSAAAHMPFVGAVGPKFFLKDSMEEVAAIKDIGNYF
DRAEYIKWKSFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHEKYLWTNAAFAFAANMVKSFIKNGWC
VQIRGPQAGGAVTDLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTANA
TANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNTWIRTLVTEMTDPGDDLQASHPLRDAKVTVEDIED
NPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-103 45
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 2e-103 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_23341 YP_005418930.1 type VI secretion protein EvpB VFG2475 Protein 2e-114 48
Q7S_23341 YP_005418930.1 type VI secretion protein EvpB VFG2093 Protein 2e-112 46
Q7S_23341 YP_005418930.1 type VI secretion protein EvpB VFG2070 Protein 2e-90 41