Gene Information

Name : RSPPHO_00751 (RSPPHO_00751)
Accession : YP_005416347.1
Strain : Rhodospirillum photometricum DSM 122
Genome accession: NC_017059
Putative virulence/resistance : Resistance
Product : Drug resistance transporter, Bcr
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 936379 - 937581 bp
Length : 1203 bp
Strand : +
Note : -

DNA sequence :
ATGAGCACCCCGCGCCCGACATGGGCTTTCTCGCTGTCGGCGGCTTTGCTGCTGATGGCGCCTTTTGACGTTCTCGCGTC
GCTAGCGATGGACCTGTATCTCCCCGTCGTTCCCGCGATGCCCGGTCTTTTGAACACGACACCCTTTCTCATCCAACTCA
CCCTGAGCCTGTACATGGGGATGCTCGGTGTGGGGCAGGTGATCTTCGGCCCGATGTCGGATCGGCTGGGGCGGCGGCCC
GTGCTGTTGGTCGGTGGATCGGTTTTCGTTGTCGCCTCTCTCGGCGCGGCGTGCTCGTCCACGGCCACGGCCTTTGTCGC
GTTTCGTCTGCTGCAAGCGATGGGGGCCTCGGCGGCCTTGGTGGCGACCTTCGCGACGGTTCGCGATGTTTATGGCCGCC
GGCCCGAGGGCGTTGTCATTTACGGTCTTTTCAGTTCGATTCTGGCTTTCGTGCCCGCCCTTGGCCCCCTTGTGGGCGCG
TTGATCGGGGCGTGTTGCGGGTGGCGGGCGATTTTTGTGGTGCTGGCTGTCCTGGCCGTGCCGGCGCTGGTGAATGCTGG
GGTCCAATGGCCTGAAACCCGCCCGGTGGTGGCCGCCAAGACGCGCCGCTTCGTTCTGCCGATCGTCACCAGCGTGGCCT
TTTGGGTTTACACGCTGGGCTTCAGTGCCGGCATGGGCACCTTCTTCGTCTTCTTTTCAACCGCCCCTCGTGTGCTCATC
GGCCAAGCGGGCTTTTCCGAGGTCGGCTTCAGCGTGGCTTTTGCGGGCGTCGCGGTCGTCATGATCGTGACAACCCGTTT
CGCTAAAGCCTTTGTCGCCCGCTGGGGCATCGCGGGATGCGTTGCGCGCGGGATGGTGCTGCTTGTGTGCGGGGCCGTCT
TCCTGGCTCTCGGTGAACTCTTCGGCTCGCCCTCGGTCCTGACCTTCATTCTGCCCATGGGGGGGATGGCGGTTGGCATT
GTGGTTACGGTGTCCGTGACCGCCAACGGGGCCCTCGCACGGTTCGACGACACCGCCGGATCGGCTGTCGCCCTCTACTT
CTGTTTCCAAAGCCTGATCGTCAGCCTCGCCGGGACGGGGGCGGTCGCCCTGCTCAACGGCGACACGGCATGGCCGATCA
TCGGGTACGCCGTGACGATGGCGGGGCTGGTCCTGGCGGGGCTGGCGCTGCTGCGCGTCCGTCCCGGCGAGCGGCCCGCC
TGA

Protein sequence :
MSTPRPTWAFSLSAALLLMAPFDVLASLAMDLYLPVVPAMPGLLNTTPFLIQLTLSLYMGMLGVGQVIFGPMSDRLGRRP
VLLVGGSVFVVASLGAACSSTATAFVAFRLLQAMGASAALVATFATVRDVYGRRPEGVVIYGLFSSILAFVPALGPLVGA
LIGACCGWRAIFVVLAVLAVPALVNAGVQWPETRPVVAAKTRRFVLPIVTSVAFWVYTLGFSAGMGTFFVFFSTAPRVLI
GQAGFSEVGFSVAFAGVAVVMIVTTRFAKAFVARWGIAGCVARGMVLLVCGAVFLALGELFGSPSVLTFILPMGGMAVGI
VVTVSVTANGALARFDDTAGSAVALYFCFQSLIVSLAGTGAVALLNGDTAWPIIGYAVTMAGLVLAGLALLRVRPGERPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
floRc AGK07102.1 chloramphenicol and florfenicol resistance protein Not tested SGI1 Protein 4e-115 79
floR YP_005176183.1 florfenicol / chloramphenicol efflux protein Not tested ICEPmu1 Protein 8e-115 79
flo AAK02049.1 chloramphenicol and florfenicol resistance protein Not tested SGI1 Protein 4e-115 79
floRc AGK06972.1 chloramphenicol and florfenicol resistance protein Not tested SGI1 Protein 4e-115 79
cmlA9 ABZ01840.1 CmlA9 chloramphenicol efflux protein Not tested SGI2 Protein 5e-114 77
cmlA CAJ77032.1 chloramphenicol and florfenicol resistance protein Not tested AbaR1 Protein 5e-114 77
cmlA5 CAJ77046.1 Chloramphenicol resistance protein Not tested AbaR1 Protein 5e-69 51
cml(A)5 ACY75522.1 CmLA(5) Not tested Tn6060 Protein 4e-69 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSPPHO_00751 YP_005416347.1 Drug resistance transporter, Bcr NC_010410.6003586.p0 Protein 3e-69 50
RSPPHO_00751 YP_005416347.1 Drug resistance transporter, Bcr AF294653.1.gene4.p01 Protein 8e-69 50
RSPPHO_00751 YP_005416347.1 Drug resistance transporter, Bcr DQ984668.gene.p01 Protein 3e-69 50
RSPPHO_00751 YP_005416347.1 Drug resistance transporter, Bcr AF156486.gene.p01 Protein 3e-68 50
RSPPHO_00751 YP_005416347.1 Drug resistance transporter, Bcr DQ522237.1.gene4.p01 Protein 3e-69 50