Gene Information

Name : RSPPHO_03086 (RSPPHO_03086)
Accession : YP_005418682.1
Strain : Rhodospirillum photometricum DSM 122
Genome accession: NC_017059
Putative virulence/resistance : Virulence
Product : ABC transporter transmembrane region
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.29
Position : 3706795 - 3708642 bp
Length : 1848 bp
Strand : +
Note : -

DNA sequence : 
GTGGCAGACCCACGAGGCGGCGCGCGCGTGGACCCTTCGCCTTTCCTCGTCTGGAGTCTCGGCATGACCGCTCCGTCCTC
TTCCGCCCCCGAGGCCATCGCGGGCGTTCTGGTCACGTGGCGCCGGCTGCTGATGGTGGCTGGCCCCGAAGCCCGTCGCT
ATCGCCGGGCCGTGGCCTTGTTCAGTCTGGCCGCCGTGGCGCAAGGGCTGGCCTTGTGCTGCTTGTTTCCGTTGTTCGAG
GCGCTGTTGGCCGGGCCGCCCGCCTGGGGGAGCGTGGCGCTGTGGCTGGCGATTATGCTGGGGGCGGCGGCCGCCGATCT
GGTCTTTTCCTGGCACGGTCATGCGTTTGAATACGATGGCACCATTGCCGACGTGACCCATGCGCTGCGCCTGGACCTGG
GCGAACGTTTGCGGCGCATGCCCATGGAGATCCTGGCCCGTCACCGCACCGGCGACGTGAGCACCACCTTGGGCAGCCAC
ATCGACGAAGCCGTGGTGCCCATGGGCACCTTGTCCCAGGTCATGATTCGCACCGTGGGGGTGCCGCTGACGGTGATCGG
GGTCACGGCCTTTATCAGTCCCGGGTTGGCGCTGGCGCTGGCGCTGATCTTGCCCCTGGCCGTGCCGATCTATCGCCACC
AGCGCCGCGCCTCGGCCCGGGAGCGGCGCGAGGGGGCCGCCGCCCACGCCCGCACCGAATCCGATCTCATCGAATACACC
CAGGGCCTCGCCGTGCTGCGCGCCGTGAGCCAGACGGGGCGCCAGGCCGGCCGCCTGCGCGAGAGCTTGGCCGCCTTGCG
TCGGGTTCAGACCGAGGCCTTGCTGGCCTCCCTGGCGCCGGCCCTCCTGATGTCGGGGTTGATGGAACTGGGCTTGCTGG
CCGTGTTGGGTCTGGGGGTCCTGTGGGTAAGCAACGGCAGCTTGGCCCTTTCGGCGCTGGCGGCCTTGCTCATTATCGTG
ATGCGCCTGGGCGAGCCCTTGGCCTTGTTTTCCGAGCTGACCAAGACCTTCGACCTGATGGAGGCGGCTCTGGAACGGCT
GGAAGCCCTGCGATCGGTGCCGTCCTTGCCCCTCTTGCCCGCCGCCCCCCGGGTGCCGGACGCCCCGGCGGTGAGCTTTG
AACACGTCAGCTTCACCTATGCCGGGACCGAGACCCCTGCCTTGCGCGACGTGAGCTTCCGGTTGGCCCCGCGTACCCTG
ACCGCCCTGGTCGGGCCTTCGGGATCGGGCAAGAGCACCGTGGCTCGGTTGCTGCTGCGTCATGCCGATCCGCAAGCCGG
GGTCATCTCCCTCCAGGGCCAGGACATCCGCACCCTGGCCCCCGAGACCTTGATGCGCCAGCTCTCGGTGGTGTTCCAAG
ACGTGCATCTCTTTAATGAGAGCATCTTGGAAAACATCCGCATGGGTCGGCCCGACGCCGACGACGCCGCCGTTCTTGAC
GCGGCGCGGGCCGCCCATTGCCTGGACTTCATCAATCGCCTGCCCCAGGGCATCCATACCCCCGTGGGCGATATCGGCGG
CAGTTTGTCGGGTGGCGAGCGCCAGCGCCTCAGCATCGCGCGTGCCATCTTGAAGGACGCCCCCCTGGTACTCCTCGACG
AGCCGACCGCCGCCCTCGATACCGAGAGCGAACGCGTCGTGCAAAGCGCCATCGACGCCTTGGTGCAAGACCGCACGGTG
ATCGTCATCGCGCACCGCCTGTCCACCGTGGTTGCTGCCGATACTTTGCTGGTCTTCGACCAAGGGCGGATCGTTGAGCA
GGGATCCCATGGCGCCTTGCTTGCAGAGGGGGGGGCCTATGCCGCGTTGTGGCGGGCCCAAGACGGGCTGAAGGCATGGC
ATGCGTGA

Protein sequence : 
MADPRGGARVDPSPFLVWSLGMTAPSSSAPEAIAGVLVTWRRLLMVAGPEARRYRRAVALFSLAAVAQGLALCCLFPLFE
ALLAGPPAWGSVALWLAIMLGAAAADLVFSWHGHAFEYDGTIADVTHALRLDLGERLRRMPMEILARHRTGDVSTTLGSH
IDEAVVPMGTLSQVMIRTVGVPLTVIGVTAFISPGLALALALILPLAVPIYRHQRRASARERREGAAAHARTESDLIEYT
QGLAVLRAVSQTGRQAGRLRESLAALRRVQTEALLASLAPALLMSGLMELGLLAVLGLGVLWVSNGSLALSALAALLIIV
MRLGEPLALFSELTKTFDLMEAALERLEALRSVPSLPLLPAAPRVPDAPAVSFEHVSFTYAGTETPALRDVSFRLAPRTL
TALVGPSGSGKSTVARLLLRHADPQAGVISLQGQDIRTLAPETLMRQLSVVFQDVHLFNESILENIRMGRPDADDAAVLD
AARAAHCLDFINRLPQGIHTPVGDIGGSLSGGERQRLSIARAILKDAPLVLLDEPTAALDTESERVVQSAIDALVQDRTV
IVIAHRLSTVVAADTLLVFDQGRIVEQGSHGALLAEGGAYAALWRAQDGLKAWHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp7 CAB46572.1 inner membrane ABC-transporter, Irp7 Virulence HPI Protein 9e-81 44
irp7 YP_001006812.1 inner membrane ABC-transporter YbtQ Not tested HPI Protein 1e-80 44
irp7 YP_002346905.1 ABC transporter permease Not tested HPI Protein 1e-81 44
ybtQ NP_669703.1 permease and ATP-binding protein of yersiniabactin-iron ABC transporter Virulence HPI Protein 1e-81 44
ybtQ NP_993010.1 ABC transporter permease Virulence HPI Protein 1e-81 44
ybtQ YP_070127.1 ABC transporter permease Virulence HPI Protein 1e-81 44
ybtQ CAA21387.1 - Virulence HPI Protein 1e-81 44
APECO1_1055 YP_853072.1 ABC transporter Not tested PAI IV APEC-O1 Protein 1e-81 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSPPHO_03086 YP_005418682.1 ABC transporter transmembrane region BAC0433 Protein 7e-82 44