Gene Information

Name : RSPPHO_03069 (RSPPHO_03069)
Accession : YP_005418665.1
Strain : Rhodospirillum photometricum DSM 122
Genome accession: NC_017059
Putative virulence/resistance : Unknown
Product : capsid portal protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3687705 - 3688688 bp
Length : 984 bp
Strand : -
Note : -

DNA sequence :
ATGTCAAATAGCAAGGCGCCGGGATCGATCTCTGCCTTTACCTTCGGCGACCCTGTGCCGGTGTTGGACCACCGCGAAAT
TGGCGGATACTTCCACTCGGCCTTCAACGGCTCGTTTTATGAGCCGCCAGTGTCGTTTGACGGCCTAGCCCGGGCCTTGC
TGGCCAACCCTCACCATCAATCGGCCGTTGCTCTCAAGGTGCAAAAGCTGGCAGCCGCTTATCGCCCGCACCCCCTGTTG
TCGCGCACCGACTGCAAGCGACTGGTTCAGGACTTTGTCGTGTTCGGTAACGCATGGCTAGAACGTATCGACAACGTTTT
CGGCAAACCTCTGACCTTGCGCCCGACGCTCGCTAGGTACACCCGGCAACGGCCCGATGGCCGGGCGGTGCTATTGGTTG
ATGGGGTTGAACATGTGTTTGCACCAGAGGCCACCTTGCACTTGTGCGAGCCCGATGTGTCGCAGGAGGTCTATGGTCGG
CCGAGCTACGAGGCTGCCTTGCAGTCCGCGTTTCTCAACGAAGCGGCCACTCTCTTTCGCCGAAAATACTATGTGAACGG
CAGTCATGCCGGGTTCATCCTGTACATGACAGACCCGGCGCAGACCCAAGAAGATGTGGACACTCTGCGAGATGCACTGA
AAAACGCCAAAGGCCCTGGAAATTTTCGGAACCTGTTTCTTTATTCACCAAACGGTAAAAAGGACGGCCTCCAAGTTATC
CCGATCTCCGAGGTCATGGCGAAAGATGAATTTTTAAACATGAAGAACGTTACACGGGATGATTTGTTGGCCGCCCACCG
CGTGCCCCCGCAGCTACTGGGGATTGTTCCCAGTAATGCAGGCGGATTTGGCGATATCGAAAAAGCATCACGAGTTTGGG
CAGCCCTGGAACTCGGCCCCCTCGGTGAGGCCCTGGCCGACCCGATCAACCGCTGGCTGGGCGAAAAGGTGGTGCTGTTC
GAGGGGCTCGTCTCTGGAAGCTAG

Protein sequence :
MSNSKAPGSISAFTFGDPVPVLDHREIGGYFHSAFNGSFYEPPVSFDGLARALLANPHHQSAVALKVQKLAAAYRPHPLL
SRTDCKRLVQDFVVFGNAWLERIDNVFGKPLTLRPTLARYTRQRPDGRAVLLVDGVEHVFAPEATLHLCEPDVSQEVYGR
PSYEAALQSAFLNEAATLFRRKYYVNGSHAGFILYMTDPAQTQEDVDTLRDALKNAKGPGNFRNLFLYSPNGKKDGLQVI
PISEVMAKDEFLNMKNVTRDDLLAAHRVPPQLLGIVPSNAGGFGDIEKASRVWAALELGPLGEALADPINRWLGEKVVLF
EGLVSGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 1e-76 57
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 1e-76 57
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 7e-64 54