Gene Information

Name : RSPPHO_02828 (RSPPHO_02828)
Accession : YP_005418424.1
Strain : Rhodospirillum photometricum DSM 122
Genome accession: NC_017059
Putative virulence/resistance : Resistance
Product : cystathionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.1
Position : 3393763 - 3394935 bp
Length : 1173 bp
Strand : -
Note : -

DNA sequence :
ATGACCGCCTCCCTTATTTCATCCCCCCGGGGCTTCGCCACCTTGAGCGTCCATGCCGGTCATGGCGCCGATCCGACGAC
GGGCGCGGTGATGACGCCCATTTACGCAAGCTCCACCTTTGCCCAGAGCTCACCGGGGCAGCACACCGGATGGGAATATG
CCCGGTCGGGCAACCCGACCCGCGCCGCTTTTGAGCGGGCGGTGGCCGAGTTGGAAGGGGGCACCCACGGCTTTGCCTTC
GCCTCGGGCTTGGCGGCCGAGACAACGGTGCTCGACCTGCTCGATCACGGCGCGCACATCGTGGCCGGGGCGGATCTCTA
TGGGMGGTCGTGGCGACTGTTTGCCAAGGTGAGAGCCCGCACGCAGGGCCTGGAGACCACCTTTGTGGATCCCACTGACC
TTGCCGCCCTGGAAGCCGCCTTGCGGCCCGAGACCAAGCTGATCTGGATCGAGACCCCCAGCAACCCCCGGCTGGCTGTC
ACCGATCTGGCGGCGGTCGCCGCCTTGGCGCGCGCGCGGGGCCTGCTTACCGTAGTGGATTCCACCTTCGCCACGCCGTG
GATCCAGCGCCCGCTGGAACTGGGCATTGATATCGTGGTGCACTCGGCGACCAAGTATCTCAATGGTCACTCGGACCTGA
TCGCCGGGGTGGTGGCGGTGAAGGACGCCGAGTTAGCGGAGCGGCTGGGATTTCTTCAGAACGCCACAGGCGCGGTCCTG
GATCCGTTTGCGTCGTTTCTCGCCCTGCGTGGCCTGAAGACCCTGGCGCTGCGCATGGACCGTCATTCGACGAACGCGCT
GGCCGTGGCCCATCACCTGGAGCACCATCCCAAGGTGGCCCGAGTCCTGTACCCCGGTCTGCCCAGCCATCCCCAGCACG
CCTTGGCGCGGCGGCAGATGCGGGCCTTTGGCGGCATGCTGAGTGTGGAACTGGCCACCGATCGCCCCGGCACGGTCCGT
TTCCTGGAGGCCTTGCGGCTGTTCACGTTGGCCGAAAGCCTGGGCGGCGTGGAGAGCCTGATCGGGCATCCGGCGACCAT
GAGCCATGGCTCGCTGCCGCCCGAGCGCCGAGCCGACTTGGGCTTGCATGACGCGTTTGTGCGGGTGTCGGTGGGCATCG
AGGACGCCGCCGACCTGATCGCCGATCTGGACCAGGCCCTGGACCGGATCTAA

Protein sequence :
MTASLISSPRGFATLSVHAGHGADPTTGAVMTPIYASSTFAQSSPGQHTGWEYARSGNPTRAAFERAVAELEGGTHGFAF
ASGLAAETTVLDLLDHGAHIVAGADLYGXSWRLFAKVRARTQGLETTFVDPTDLAALEAALRPETKLIWIETPSNPRLAV
TDLAAVAALARARGLLTVVDSTFATPWIQRPLELGIDIVVHSATKYLNGHSDLIAGVVAVKDAELAERLGFLQNATGAVL
DPFASFLALRGLKTLALRMDRHSTNALAVAHHLEHHPKVARVLYPGLPSHPQHALARRQMRAFGGMLSVELATDRPGTVR
FLEALRLFTLAESLGGVESLIGHPATMSHGSLPPERRADLGLHDAFVRVSVGIEDAADLIADLDQALDRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-71 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-72 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-53 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSPPHO_02828 YP_005418424.1 cystathionine gamma-lyase BAC0207 Protein 2e-61 46