Gene Information

Name : RSPPHO_01922 (RSPPHO_01922)
Accession : YP_005417518.1
Strain : Rhodospirillum photometricum DSM 122
Genome accession: NC_017059
Putative virulence/resistance : Virulence
Product : Two component transcriptional regulator, winged helix family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2295058 - 2295747 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence :
ATGGCGATGCGTATTCTGGTGATCGAGGACGACCCCGAGGTTTCGGCCCACCTTCTCAAAGGTCTGCGCGAGGCCGGGCA
TGTGGTCGATGGCGTGACCCAGGGGCGCGACGGCTTGTTTCAGGCGGCCACCGAGGCTTATGACCTGCTCATCGTCGATC
GCATGCTGCCGGGGGTGGATGGTCTCACCATCATTCGCACGTTGCGGGCCTCCGACAACACGGTGCCGGTTCTCATCCTC
TCGGCTTTGGGCGAGGTGGATGATCGGGTCAAGGGTTTGCGGGCCGGGGGCGACGACTATCTGGTCAAGCCCTTTGCCTT
TTCCGAATTGCTGGCCCGCCTCGATGCCCTGGCGCGCCGCGCCCAAAACACCGAGGGCGAGCCCACCCGTTTGCGGGCCG
GCGAGTTGGAGATGGACCTGTTGTCGCGGCGCGTCACCCGGGCGGCTAAGGTCATCGACCTGCAACCCCGCGAATTCCGC
TTGCTGGAATACCTGATGCGCCACGCCGGGCAGGTGGTGACGCGTACCATGTTGCTGGAAAACGTGTGGGATTATCACTT
CGATCCCCAGACCAACGTGGTGGATGTGCATATCAGTCGGCTACGGCGCAAAATTGATGAGGGCTTCGACAAGCCCTTCT
TGGAAACCGTGCGGGGTGCCGGCTATGTCCTCCTTACCGGCGAAGCCTGA

Protein sequence :
MAMRILVIEDDPEVSAHLLKGLREAGHVVDGVTQGRDGLFQAATEAYDLLIVDRMLPGVDGLTIIRTLRASDNTVPVLIL
SALGEVDDRVKGLRAGGDDYLVKPFAFSELLARLDALARRAQNTEGEPTRLRAGELEMDLLSRRVTRAAKVIDLQPREFR
LLEYLMRHAGQVVTRTMLLENVWDYHFDPQTNVVDVHISRLRRKIDEGFDKPFLETVRGAGYVLLTGEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-40 48
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-39 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSPPHO_01922 YP_005417518.1 Two component transcriptional regulator, winged helix family BAC0083 Protein 9e-49 53
RSPPHO_01922 YP_005417518.1 Two component transcriptional regulator, winged helix family BAC0125 Protein 5e-49 52
RSPPHO_01922 YP_005417518.1 Two component transcriptional regulator, winged helix family BAC0197 Protein 1e-44 51
RSPPHO_01922 YP_005417518.1 Two component transcriptional regulator, winged helix family BAC0638 Protein 3e-41 50
RSPPHO_01922 YP_005417518.1 Two component transcriptional regulator, winged helix family BAC0347 Protein 1e-43 49
RSPPHO_01922 YP_005417518.1 Two component transcriptional regulator, winged helix family BAC0111 Protein 3e-47 48
RSPPHO_01922 YP_005417518.1 Two component transcriptional regulator, winged helix family BAC0308 Protein 2e-40 46
RSPPHO_01922 YP_005417518.1 Two component transcriptional regulator, winged helix family HE999704.1.gene1528. Protein 1e-29 41
RSPPHO_01922 YP_005417518.1 Two component transcriptional regulator, winged helix family AE016830.1.gene1681. Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSPPHO_01922 YP_005417518.1 Two component transcriptional regulator, winged helix family VFG0596 Protein 8e-41 48
RSPPHO_01922 YP_005417518.1 Two component transcriptional regulator, winged helix family VFG1389 Protein 2e-32 46
RSPPHO_01922 YP_005417518.1 Two component transcriptional regulator, winged helix family VFG1390 Protein 5e-34 41