Gene Information

Name : RSPPHO_01389 (RSPPHO_01389)
Accession : YP_005416985.1
Strain : Rhodospirillum photometricum DSM 122
Genome accession: NC_017059
Putative virulence/resistance : Virulence
Product : flagellar transport protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1679836 - 1680609 bp
Length : 774 bp
Strand : +
Note : -

DNA sequence :
ATGAGTTTTGCCCCGCGTCACGCCTTGTTGCCGCTGCTTGCGCTGTTGCCGCTGCTGGGTGTCTTGCTGCTGCCCGATCC
CGCGTGGGCCCAATCGCTGAACCTTGACCTGGGTCCTGACTCCGGCTCGACGACGGCACGACTGTTCCAGTTGGTGGCCC
TGCTCACCGTCTTGAGCGTGGCTCCGGGACTTCTGATCATGGTCACCAGTTTCACGCGCATTGCCGTGGTACTGTCGATC
TTGCGTCAGGCCCTGGGCACCCAGACCACACCGCCCAACATGGTCCTGATCAGCTTGGCCATGTTCATGACCTTTTTCAT
CATGGCCCCGACCTTTCAGCAGGCCTGGGACGACGGCGTTGCCCCTTTGATCCGCGAGGATATTACCGAGGAGCAGGCGT
TCGAGCGCACGGTCGAGCCCTTCCGGGCTTTCATGCTGCACCATGTCCGGCCCAAGGACTTGGAGCTGTTCGCCAAGTTT
CGCGGCGAGAAGGCTGAAACGGTGGAGCAGGTGTCAACGTGGTCCCTGGTGCCCGCCTTCATGATCAGCGAGTTGCGCCG
GGCGTTCGAGATTGGCTTTTTGATTTACCTGCCGTTTATTGTCATCGATATGGTGATCGCCTCGGTCTTGATGTCGATGG
GCATGATGATGCTGCCGCCCATGATGCTGGCGATGCCGTTTAAGCTGATTTTCTTTGTGCTGGTGGATGGCTGGTATTTG
GTGGTGGGCTCGTTGCTCTCGAGCTACAGCACGGTGCCCGGCGTTGGGGGGTAA

Protein sequence :
MSFAPRHALLPLLALLPLLGVLLLPDPAWAQSLNLDLGPDSGSTTARLFQLVALLTVLSVAPGLLIMVTSFTRIAVVLSI
LRQALGTQTTPPNMVLISLAMFMTFFIMAPTFQQAWDDGVAPLIREDITEEQAFERTVEPFRAFMLHHVRPKDLELFAKF
RGEKAETVEQVSTWSLVPAFMISELRRAFEIGFLIYLPFIVIDMVIASVLMSMGMMMLPPMMLAMPFKLIFFVLVDGWYL
VVGSLLSSYSTVPGVGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscR AAO18040.1 LscR Virulence TTSS locus Protein 7e-25 43
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 8e-23 42
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 1e-23 42
hrcR NP_791222.3 type III secretion protein HrcR Virulence Hrp PAI Protein 7e-17 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-23 41
hrcR AAG33884.1 HrcR Virulence Hrp PAI Protein 2e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RSPPHO_01389 YP_005416985.1 flagellar transport protein FliP VFG2494 Protein 2e-41 51
RSPPHO_01389 YP_005416985.1 flagellar transport protein FliP VFG2338 Protein 3e-37 48
RSPPHO_01389 YP_005416985.1 flagellar transport protein FliP VFG1259 Protein 2e-37 48
RSPPHO_01389 YP_005416985.1 flagellar transport protein FliP VFG0394 Protein 1e-26 45
RSPPHO_01389 YP_005416985.1 flagellar transport protein FliP VFG2016 Protein 3e-40 45
RSPPHO_01389 YP_005416985.1 flagellar transport protein FliP VFG0188 Protein 3e-25 42