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Name : irbB (MGAS1882_0200) Accession : YP_005410968.1 Strain : Streptococcus pyogenes MGAS1882 Genome accession: NC_017053 Putative virulence/resistance : Virulence Product : prophage gene expression coactivator protein IbrB Function : - COG functional category : - COG ID : - EC number : - Position : 177092 - 177622 bp Length : 531 bp Strand : + Note : CDD hit: non-specific, cl2129 = ParB-like nuclease domain; Plasmid RK2 ParB preferentially cleaves single-stranded DNA. ParB also nicks supercoiled plasmid DNA preferably at sites with potential single-stranded character, like AT-rich regions and sequence DNA sequence : GTGAGTAATTTTATTAGTCCAGTCTATGAGATTAAATCAATTCCAATTGAAAAGATTTCTCCAAATGATTATAATCCGAA TTCAGTTGCTCCGCCTGAAATGAAATTATTGTATGATAGTATAAAATCTGATGGTTATACTATGCCGATTGTTTGCTATT ACGATAAGGAAGAGGATCGGTATAGTATTGTTGATGGTTTTCATAGATATCGTATAATGCTAGATTATTCAGATATTTAT GAAAGGGAAAGTGGGAGATTACCTGTTTCTGTTATTGATAAGTCATTAGACTATCGAATGGCTTCTACCATTCGACATAA TAGAGCTAGAGGAAGTCATGATGTTGATTTGATGAGTCAGATTGTAAAGGATCTTCATGAGTGTGGGCGAAGTGATAACT GGATTGCAAAACATTTAGGAATGGATAAAGATGAAATTTTAAGACTGAAACAAATAACAGGATTGGCTTCTCTTTTTAAG GACCATGAGTTTAATCAATCTTGGGAACCAGAAGAGTTATTAAATGAGTAA Protein sequence : MSNFISPVYEIKSIPIEKISPNDYNPNSVAPPEMKLLYDSIKSDGYTMPIVCYYDKEEDRYSIVDGFHRYRIMLDYSDIY ERESGRLPVSVIDKSLDYRMASTIRHNRARGSHDVDLMSQIVKDLHECGRSDNWIAKHLGMDKDEILRLKQITGLASLFK DHEFNQSWEPEELLNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| M5005_Spy_0164 | YP_281528.1 | parB-like nuclease | Not tested | Not named | Protein | 7e-80 | 100 |
| ef0120 | AAM75321.1 | EF0120 | Not tested | Not named | Protein | 3e-38 | 55 |
| EF0607 | NP_814365.1 | ParB-like nuclease domain-containing protein | Not tested | Not named | Protein | 4e-38 | 55 |
| STY4584 | NP_458668.1 | conserved hypothetical protein | Not tested | SPI-7 | Protein | 1e-28 | 47 |
| t4278 | NP_807876.2 | hypothetical protein | Not tested | SPI-7 | Protein | 9e-29 | 47 |
| Z1644 | AAQ19140.1 | putative ParB-like nuclease | Not tested | PAI I CL3 | Protein | 2e-29 | 46 |
| ibrB | ADD91736.1 | predicted transcriptional regulator IbrB | Not tested | PAI-I AL862 | Protein | 2e-29 | 46 |
| z1204 | CAD33764.1 | Z1204 protein | Not tested | PAI I 536 | Protein | 3e-29 | 46 |
| Z1204 | NP_286739.1 | hypothetical protein | Not tested | TAI | Protein | 4e-29 | 45 |
| Z1644 | NP_287147.1 | hypothetical protein | Not tested | TAI | Protein | 4e-29 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| irbB | YP_005410968.1 | prophage gene expression coactivator protein IbrB | VFG1505 | Protein | 1e-29 | 46 |
