Gene Information

Name : smpB (M9Y_02095)
Accession : YP_005406367.1
Strain : Rickettsia prowazekii Katsinyian
Genome accession: NC_017050
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 527428 - 527886 bp
Length : 459 bp
Strand : +
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGATAGAAGATAAGAAAGTTATTGTTCAAAATAAGAAAGCATTGTTCAATTATTTTATTGAAGAAATATTAGAAGCAGG
TATTGTATTAAAGGGTAGTGAAGTACAGTCTCTTCGTCAAGGTAAAGCTTCTATAGAAGAAAGTCACGCATCAGATAATG
GACATGAAGTATTTTTGTATAATTGCCATATTACAGAATATGAAAAAGCGAATAGATTTAATCATTCTACTCGTAGACCA
CGTAAATTATTGTTACATGCTAAAGAGATCAAGAAAATTATTGGTAGAATTAGAATAAAAGGCTATACGCTAGTTGCACT
TTCTATGTATTTTAATAAAAAGAATAAAGTGAAAGTTGAACTTGGCATTGCTAAAGGTAAGAAGTTATACGATAAAAGAG
CTGCAATTAAAGAAAAAGATTGGAAAAAAGATCAGAGTAGGTTAATAAGACAGAAATAA

Protein sequence :
MIEDKKVIVQNKKALFNYFIEEILEAGIVLKGSEVQSLRQGKASIEESHASDNGHEVFLYNCHITEYEKANRFNHSTRRP
RKLLLHAKEIKKIIGRIRIKGYTLVALSMYFNKKNKVKVELGIAKGKKLYDKRAAIKEKDWKKDQSRLIRQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 1e-23 47
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-19 46
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 2e-18 43