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Name : Q7S_04150 (Q7S_04150) Accession : YP_005400653.1 Strain : Rahnella aquatilis HX2 Genome accession: NC_017047 Putative virulence/resistance : Virulence Product : lysine decarboxylase LdcC Function : - COG functional category : - COG ID : - EC number : 4.1.1.18 Position : 908402 - 910549 bp Length : 2148 bp Strand : + Note : COG1982 Arginine/lysine/ornithine decarboxylases DNA sequence : ATGAATATTATCGCTATCATGCGCCCGGAAGGGGCTTACTACAAAGACGAGCCGATCCGTGAACTGGATAGCGCGCTGAC GCTTCTCGGATTTCAGGTCATTTATCCGCGCGATCGCGCGGATCTGCTCAAACTCATCGAAAATAATGCCCGCATTTGCG GCGCTATTTTCGACTGGGATCAGCATAGCGAAGAGCTGTGTACAGCCATTAATGAGCTGAATGAATATCTGCCGCTTTAC GCTTTCATCAATACGCATTCGACGCTGGACGTCGACGTTAATGAAATGCGCATGGTGCTCTATTTCTTTGAATACGCACT GAGTGCGGCGGAGGATATTGCCAAACGCATCCGCCAGTACACCGATGAATACATCGATACCATTACGCCGCCGCTGACTA AAGCGTTGTTCACCTACGTAGAAGAAGGAAAGTACACTTTCTGTACGCCGGGGCATATGGCCGGTACGGCGTTTTTAAAA AGCCCGGTAGGGACGTTGTTCTATGATTTTTTCGGGGCCAAAACGTTGAAAGCCGATGTGTCGATTTCTGTGACAGAACT TGGTTCCCTGTTGGATCACACTGGTCCGCATCTAGAGGCGGAGGAATATATCGCCCGTACTTTCGGCGCCGAGCAAAGTT ATATCGTCACTAATGGCACCTCGACGGCCAATAAAATTGTCGGAATGTATGCGGCACCGGCAGGGAGTACGGTGCTGATT GACCGCAACTGTCATAAATCGCTCGCCCATCTGATGATGATGACCAATATTGTGCCGGTCTATTTGCGTCCCAATCGCAA CGCGTATGGCATTCTTGGCGGGATTCCTAAGCATGAATTCACCCGCGAAAGCATCGAAGAGAAAATTGCACAGACAGAGA ATGCTACCTGGCCAGTGCACGCAGTGATCACTAACTCGACTTACGACGGCTTGCTGTACAACACGGATTACATCAAAAAC ACACTGGATGTTCCGTCGATTCATTTCGATTCTGCATGGGTGCCATACACTAATTTCCATCCGATTTATGACGGTAAAAG CGGAATGAGCGGCGAGCGCATTCCCGGAAAAGTCATTTACGAAACGCAATCAACGCACAAACTACTGGCAGCTTTCTCTC AGGCATCGATGATTCACATTAAGGGTGATTACAACGAAAGTACCTTTAATGAAGCCTATATGATGCACACCACAACATCG CCAAATTACGGCATTGTGGCTTCTGCAGAAACTGCCGCGGCGATGTTGCGCGGTAACCCCGGACGGCGTCTCATTAACCG CTCGGTTGAACGCGCGCTGCATTTCCGTAAGGAGATACAGCGGTTGCGGGAAGAAACCGAGGGCTGGTTCTTTGATATCT GGCAGCCTGAATATATTGATGAAGCCGAGTGCTGGCCGCTGAACCCCGATCAAAACTGGCACGGTTTTGCCAACGCCGAT ACCGATCATATGTATCTTGATCCGATCAAAGTGACGATCCTGACACCCGGAATGGATGAAACGGGTAAGCTGGAAGAACA GGGGATCCCGGCGGCGTTAGTGGCGAAATTCCTCGATGAGCGCGGTGTGGTGGTAGAAAAAACCGGTCCGTACAATCTGC TTTTCCTGTTCAGTATCGGCATTGATAAAACCAAATCCATGAGTCTGATGCGTGGCCTGACTGATTTTAAGCGCAGTTAT GATCTCAATTTGCGGGTCAAGAATATGCTGCCTGATCTGTATGCGGAAGATCCTGATTTTTATCGCAATATGCGGATTCA GGATCTGGCGCAGGGGATCCACAAACTGATCGTTCGTCACGACCTGCCGCGTTTAATGCTGGAAGCATTTGATGTGCTGC CTGAAATGAAAATGACGCCGTACGAAATGTTCCAGCATCAGGTACGCGGACATATTGATGAATGCGACATTGATGAACTG GTCGGCAAAGTATCAGCCAACATGATCCTGCCTTATCCGCCGGGTGTACCTGTAGTGATGCCGGGCGAGATGATCACGGA AGAAAGTCGGGCTGTGCTCGATTTCCTGATTATGCTTTGTTCAATAGGCGAGCGTTACCCTGGTTTTGAAACTGATATTC ATGGAACGCGGCTCACAGAAGACGGGCGCTATCTGGTGAAGGTCTTAAAACTTCCGGAAGCGGGCTAG Protein sequence : MNIIAIMRPEGAYYKDEPIRELDSALTLLGFQVIYPRDRADLLKLIENNARICGAIFDWDQHSEELCTAINELNEYLPLY AFINTHSTLDVDVNEMRMVLYFFEYALSAAEDIAKRIRQYTDEYIDTITPPLTKALFTYVEEGKYTFCTPGHMAGTAFLK SPVGTLFYDFFGAKTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTANKIVGMYAAPAGSTVLI DRNCHKSLAHLMMMTNIVPVYLRPNRNAYGILGGIPKHEFTRESIEEKIAQTENATWPVHAVITNSTYDGLLYNTDYIKN TLDVPSIHFDSAWVPYTNFHPIYDGKSGMSGERIPGKVIYETQSTHKLLAAFSQASMIHIKGDYNESTFNEAYMMHTTTS PNYGIVASAETAAAMLRGNPGRRLINRSVERALHFRKEIQRLREETEGWFFDIWQPEYIDEAECWPLNPDQNWHGFANAD TDHMYLDPIKVTILTPGMDETGKLEEQGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIGIDKTKSMSLMRGLTDFKRSY DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIVRHDLPRLMLEAFDVLPEMKMTPYEMFQHQVRGHIDECDIDEL VGKVSANMILPYPPGVPVVMPGEMITEESRAVLDFLIMLCSIGERYPGFETDIHGTRLTEDGRYLVKVLKLPEAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 74 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Q7S_04150 | YP_005400653.1 | lysine decarboxylase LdcC | VFG1670 | Protein | 0.0 | 66 |
