Gene Information

Name : Q7S_03170 (Q7S_03170)
Accession : YP_005400464.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 695558 - 698113 bp
Length : 2556 bp
Strand : -
Note : COG0249 Mismatch repair ATPase (MutS family)

DNA sequence :
ATGACAAATAATGTAAACCTGGATGCCCACACCCCGATGATGCAGCAGTATCTGCGTCTGAAAGCTGAGAACCCGGAAGT
TCTGCTGTTCTATCGCATGGGTGACTTTTACGAACTGTTTTATGACGATGCGAAACGCGCATCTCAGCTGATGGATATCT
CCCTGACCAAACGCGGCGCTTCTGCCGGTGAGCCGATCCCGATGGCGGGCGTGCCTTATCATGCGGTAGAAGGTTATCTG
GCGAAACTGGTCCAGCTAGGGGAATCCGTCGCGATTGCTGAACAAATTGGCGACCCGGCCCTAAGTAAAGGGCCGGTTGA
ACGCAAAGTGGTACGCATCGTCACGCCGGGCACCGTCAGTGACGAAGCATTGCTGAGCGAGCGTCATGATAACCTGCTGG
CGGCTATCTGGCAGGACGGGCGCGGGTTTGGTTATGCCACGCTGGATATCAGTTCCGGCCGTTTCCGCGTCGCACAGCCT
GACGATCTGGAAACCATGGCAGCCGAATTACAGCGCACAAATCCGGCGGAATTACTCTACCCGGAAAGCTTTGAAGCCAT
GTCGCTGATTTCCTCCCGCCGTGGCCTGCGCCGCCGTCCGATGTGGGAATTCGAGCTGGAAACCGCGAAACAGCAGCTTA
ATCTGCAATTCGGTACCCGCGATCTGAGCGGCTTCGGCGTTGAGCAGGCTGCTCAGGCGCTGCGTGCTGCCGGTTGTCTG
CTGCAATACGTTAAAGATACCCAGCGCACCGCCCTGCCGCATATCCGTGGCGTCACCATGGAGCGCCAGCAGGATGGGAT
TATTATGGATGCGGCCACGCGCCGTAATCTGGAGCTGACGCAAAATCTGGCGGGTGGTGTAGAGAACACGCTGGCGGCAG
TGCTGGATCAGGCCGTAACGCCGATGGGCAGCCGCATGCTCAAGCGCTGGATCCACATGCCGAGCCGCGATATCAAACTG
CTGACGCATCGTCAGCAGGCGATTGGTGCGTTACAGGATATCACCGCCGATTTACAGCCGGTGCTGCGTCAGGTCGGCGA
CCTCGAGCGTATTCTGGCACGTCTGGCACTGCGCAGCGCACGTCCGCGTGATCTGGCCCGTATGCGTCATGCCATGCAGC
AACTGCCGGAAATCCGCGAGATCTTGCAGGGAACCGAAGCCGCTCATGTGAAAACGCTGGTGGAGCAAACCGGTGACTTT
ACCGAACTGGTGGAACTGCTTGAACGCGCTGTGATCGAAAGCCCGCCGGTTCTGGTGCGTGACGGTGGCGTAATCGCACC
AGGTTACAACGCTGAGCTGGATGAATGGCGTGCGCTGGCAGACGGCGCGACGGATTATCTCGATCGTCTGGAGATCCGCG
AACGTGAAAAGCTGGGGCTGGATACGCTGAAAGTCGGTTTCAACGGCGTTCACGGTTATTACATTCAGGTCAGCCGTGGG
CAGAGCCATCTGGTGCCGATTCATTACGTCCGTCGCCAGACGCTGAAAAATGCCGAGCGCTACATCATTCCTGAGCTGAA
AGAGTACGAAGACAAGGTGCTGACCTCCAAAGGTAAAGCCTTGTCTCTGGAAAAGGCGCTGTACGAAGAGTTGTTCGATT
TGCTGATGCCGCACCTGTCTGCATTACAGCAAAGCGCCAGTGCACTGGCCGAACTGGATGTGCTGAGCAATCTGGCGGAA
CGTGCTTACACGCTCAATTACGCCTGTCCGACCATGAGTGAAAAACCGGGTATTAATATTACCGGCGGTCGCCATCCGGT
GGTTGAGCAGGTGCTAAGTGAACCGTTTATTTCTAACCCGCTGAACATGTCCCCGGCGCGACGGATGCTTATTATCACCG
GTCCGAACATGGGCGGTAAAAGTACCTATATGCGCCAGGCAGCACTGATTGTTCTGATGGCGCATATCGGCAGCTATGTA
CCGGCGGAAGCCGCTGTCATCGGGCCGGTGGATCGCATCTTCACCCGTGTCGGTGCCGCGGACGATCTGGCTTCCGGGCG
TTCGACCTTTATGGTGGAAATGACAGAGACGGCGAATATCCTGCACAACGCGACCGAAAACAGCCTGGTGCTGATGGATG
AAATCGGGCGCGGGACATCAACGTACGATGGTTTGTCGCTGGCATGGGCATGTGCGGAAAACCTCGCCAGCCGTATTAAA
GCCATGACGTTGTTCGCCACCCATTATTTCGAGCTGACCACCCTGCCGGAAAAAATGGAAGGCACCGTCAACGTGCATCT
GGATGCTATCGAACACGGCGACACTATCGCGTTTATGCACAGCGTACAGGATGGCGCCGCCAGCAAGAGTTATGGTCTGG
CCGTTGCCGCACTGGCTGGTGTGCCACGTGATGTGATTAAGCGCGCCCGTCAGAAACTGAAAGAGCTGGAAACGTTGTCG
AACAACGCTGCCGCCAGCAAAGTTGACGGTCCGCAACTGGCTTTACTGACCGAAGAAGTGTCTCCGGCAGTTGAGGCACT
GGAGTCACTGGATGCAGATTCTTTATCGCCACGTCAGGCGCTGGAATGGATCTATCGTCTGAAAGATATGGTGTAA

Protein sequence :
MTNNVNLDAHTPMMQQYLRLKAENPEVLLFYRMGDFYELFYDDAKRASQLMDISLTKRGASAGEPIPMAGVPYHAVEGYL
AKLVQLGESVAIAEQIGDPALSKGPVERKVVRIVTPGTVSDEALLSERHDNLLAAIWQDGRGFGYATLDISSGRFRVAQP
DDLETMAAELQRTNPAELLYPESFEAMSLISSRRGLRRRPMWEFELETAKQQLNLQFGTRDLSGFGVEQAAQALRAAGCL
LQYVKDTQRTALPHIRGVTMERQQDGIIMDAATRRNLELTQNLAGGVENTLAAVLDQAVTPMGSRMLKRWIHMPSRDIKL
LTHRQQAIGALQDITADLQPVLRQVGDLERILARLALRSARPRDLARMRHAMQQLPEIREILQGTEAAHVKTLVEQTGDF
TELVELLERAVIESPPVLVRDGGVIAPGYNAELDEWRALADGATDYLDRLEIREREKLGLDTLKVGFNGVHGYYIQVSRG
QSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALSLEKALYEELFDLLMPHLSALQQSASALAELDVLSNLAE
RAYTLNYACPTMSEKPGINITGGRHPVVEQVLSEPFISNPLNMSPARRMLIITGPNMGGKSTYMRQAALIVLMAHIGSYV
PAEAAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLASRIK
AMTLFATHYFELTTLPEKMEGTVNVHLDAIEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPRDVIKRARQKLKELETLS
NNAAASKVDGPQLALLTEEVSPAVEALESLDADSLSPRQALEWIYRLKDMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_03170 YP_005400464.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 83