Gene Information

Name : Q7S_03055 (Q7S_03055)
Accession : YP_005400441.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Virulence
Product : RpiR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 672498 - 673337 bp
Length : 840 bp
Strand : -
Note : COG1737 Transcriptional regulators

DNA sequence : 
GTGAGTCAGACCAAGGAAACAGGCACGCTGTTACTGCGAATGCGTCAGGGACTGGAGAATTACAGTCCGACGCTGCATAA
GCTGGGCAGTTTTGTGCTGGAACAGCCGCAGCGCGTGCTTTACCTGACCATCACTGAACTGGCGCGTGAGAGTGATACCA
GTGAAGCCAGCGTCACGCGGCTTTGCCGCCAGCTGGGTTGCAAAGGGTTTACCGAGTTTAAGATGGGCCTCGCGCTTGAG
ACGCGACAAAATCCGACATTGCCGTCCGCTGGAGGGAATGACGACGTTCAGACGCTGATCGAAGACAGCATCACTGCCCT
GCGTGATACCGGAAAACTGCTCGATCGGCAGGTGCTGGCGGACGCCGCGTTTCGCATTCATAACGCGCGTTCCGTTCAGG
TGTATGGTGTTGCAGCCAGCGCTATCGTGGCGGATTATCTGGGTTACAAGCTGCTACGTCTGGGCAAAGCGTCGCAATGT
TTCGCTGATATGCACCGCGCGGCGATGAATGCCGTGAGCCTGGATAGTCAGGATATTGTGGTCGTGATTTCCAGCTCAGG
TTCCACTAAAGATGTGTTGCACGCCGCCGCGCTGGCGAAGCGTCAGGGCACCACAGTCATCGGTATCAGCAATACGTTGC
GCAGCCCGCTTTCCTCACTGGCCGATATTTTACTGGTGGCCGCCAAACCCGAAGGTCCGCTGACGGCGGGTTTACTGACG
TCCAAAGTCGGCGGGATGCTGCTGGTGGAATTACTGATCAATCAGCTGTTAACGCACTCTCCGGATTATCTGCAAGCCAG
CGAACACAGCGCGAGTGCCACGCTTTCTTTATTGCTGTAA

Protein sequence : 
MSQTKETGTLLLRMRQGLENYSPTLHKLGSFVLEQPQRVLYLTITELARESDTSEASVTRLCRQLGCKGFTEFKMGLALE
TRQNPTLPSAGGNDDVQTLIEDSITALRDTGKLLDRQVLADAAFRIHNARSVQVYGVAASAIVADYLGYKLLRLGKASQC
FADMHRAAMNAVSLDSQDIVVVISSSGSTKDVLHAAALAKRQGTTVIGISNTLRSPLSSLADILLVAAKPEGPLTAGLLT
SKVGGMLLVELLINQLLTHSPDYLQASEHSASATLSLLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1775 NP_231410.1 hypothetical protein Not tested VPI-2 Protein 5e-46 43
VC0395_A1373 YP_001217316.1 hypothetical protein Not tested VPI-2 Protein 5e-46 43
VPI2_0023c ACA01840.1 RpiR family transcriptional regulator Not tested VPI-2 Protein 4e-46 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_03055 YP_005400441.1 RpiR family transcriptional regulator VFG1108 Protein 2e-46 43