Gene Information

Name : Q7S_02740 (Q7S_02740)
Accession : YP_005400380.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 599858 - 600655 bp
Length : 798 bp
Strand : -
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
ATGAATACTGAACACTCTTCCCCTTTGTATGCGAAAGATCTGACGCTGGGCTACGATAAAAAAATCGTCGCCCGCGAACT
CTCCGTCTCTATCCCTCAGGGAAAACTCACCGTGATTATCGGGCCGAATGCCTGCGGTAAATCCACATTATTGCGCACGC
TCAGCCGCCTGATGCCGCCGCAATCCGGCACGGTATTTCTCGATGGCAAACTGATCGGTGATTACGGCACCAGAGACGTC
GCGAAACGTCTGGGTTTACTGCCGCAAAGTTCAACGGCGCCGGGCGATATCAGTGTGTCGGATCTGGTGGCCCGCGGGCG
TTACCCGCATCAGAGCCTGTTCAGCCGCTGGACAGCGCAAGATACGCTGGCGGTGAACGACGCCATGCACGCGACGGGAG
TATTCGAACTGGCGGAAAGCACGGTGAATTCACTTTCCGGCGGACAGCGCCAGCGGGTGTGGATAGCCATGGTGCTGGCG
CAACAAACGCCGTTGTTATTGCTGGATGAACCGACAACCTGGCTGGATATCGCGCATCAGATTGATTTGATGGAACTGAT
GTGTCGCCTGAATCAGGAAAACGGCCGCACGCTGGTGGTGGTGTTGCACGACCTGAATCAGGCATGTCGTTACGCCGGGC
ATCTGATTGCCATGCGCGATGGAAAAATACTGGCTGAGGGCGCACCGGCAGACATCGTCACACCGGCACTGATCGAACAG
GTTTTCGGGCTACGCTGCGCCATTATCGACTGTCCGGTTTCGCATACACCGTTAATTATCCCGCTGGGTAACGGTTGA

Protein sequence : 
MNTEHSSPLYAKDLTLGYDKKIVARELSVSIPQGKLTVIIGPNACGKSTLLRTLSRLMPPQSGTVFLDGKLIGDYGTRDV
AKRLGLLPQSSTAPGDISVSDLVARGRYPHQSLFSRWTAQDTLAVNDAMHATGVFELAESTVNSLSGGQRQRVWIAMVLA
QQTPLLLLDEPTTWLDIAHQIDLMELMCRLNQENGRTLVVVLHDLNQACRYAGHLIAMRDGKILAEGAPADIVTPALIEQ
VFGLRCAIIDCPVSHTPLIIPLGNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-65 53
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-65 53
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-52 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-65 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-65 50
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-62 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-60 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-60 49
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-54 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_02740 YP_005400380.1 ABC transporter BAC0164 Protein 3e-52 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_02740 YP_005400380.1 ABC transporter VFG0925 Protein 3e-86 65
Q7S_02740 YP_005400380.1 ABC transporter VFG1042 Protein 2e-52 50