Gene Information

Name : Q7S_00235 (Q7S_00235)
Accession : YP_005399886.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 53478 - 55016 bp
Length : 1539 bp
Strand : +
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGGCCTATGATAAAAATCCTCATGCCGTCAAACCGGAAGAATACGGTTTCCCGCTGAAACTCAAAAAACAATACGACAA
CTTTATTGGCGGTGAATGGGTCGCGCCGGTAAAAAAAGAGGATTACGACAACCTGACGCCGGTTACCGGCGAAGTGCTGT
GTAAAGTGGCCAGTTCCAGCACCGATGACGTCGATCTGGCGCTGGATGCCGCCCATCAAGCCAAAGACGCGTGGGGAAAA
ATGCCGGTGCAGCAGCGTGCAAACTTACTGCTGAAAGTCGCCGATCGCATGGAACAAAATCTTGAACTGCTGGCAAATGC
CGAAACCTGGGATAACGGCAAACCGATCCGCGAAACCAGTGGTGCAGACGTGCCGTTAGCCATCGACCATTTCCGTTATT
TCGCCTCCTGCGTACGCGCACAGGAAGGCGGGATCAGCGAAATCGACAGCGAAACCGTGGCCTATCATTTCCACGAACCG
CTGGGCGTGGTGGCACAAATTATCCCGTGGAATTTCCCGCTGCTGATGGCGTGCTGGAAAATGGCACCGGCGCTGGCGGC
AGGTAACTGCATCGTACTCAAACCGGCCAAACTGACGCCGCTGTCGGTTCTGTTGCTGATGGAACTGGTGCAGGACATTC
TGCCTGCTGGCGTCATTAACGTGGTCAACGGCGCGGGCGGGGAAATCGGCGAATATCTGGCGACCTCCAAACGTATCGCC
AAAGTCGCTTTCACCGGTTCGACGGAAGTCGGCCAGCGGATCGCCGGCTATGCTGCACAAAACCTGATCCCGGCTACGCT
GGAACTGGGCGGTAAATCGCCGAATATTTTCTTCGCCGACGTGATGGATAAAGAGGACGAATTCTTCGACAAAGCGCTGG
AAGGGTTCGCGCTGTTTGCCTTCAATCAGGGCGAAGTCTGTACCTGTCCGAGCCGTGCGCTGGTGCAGGAGTCCATCTAC
GAACGCTTTATGGAACGGGCAATCAAACGCGTGGAAGCGATCAAAACCGGTAACCCGCTGGATATGGAAACCCAGATGGG
CGCGCAGGTGTCTGCCGGACAGATGAAAACCATTCTGGATTACATCGAAATCGGTAAAAATGAGGGCGCGGAAGTCCTGA
CCGGCGGTGCGAAGAAAAAACTTGAAGGTTCGCTGAACGAGGGTTATTACCTGCAACCGACCATCTTGCTGGGTAAAAAC
AATATGCGCGTCTTCCAGGAAGAAATTTTCGGACCGGTGCTGGCGGTAACGACATTCAAAGATATGGATGAGGCGTTACA
AATCGCCAACGATACGGCGTACGGGCTGGGGGCGGGTGTCTGGAGCCGTGACGGCAACGTGGCGTATCATATGGGGCGCA
ACATTCAGGCTGGCCGTGTCTGGACCAACTGCTATCACGCCTATCCGGCACATGCGGCATTCGGCGGTTACAAACAATCC
GGTATCGGGCGCGAAACCCATAAGATGATGCTGGATCACTATCAGCAAACGAAATGTTTACTGGTGAGTTATTCGAGTAA
ACCGATGGGGCTTTTCTGA

Protein sequence :
MAYDKNPHAVKPEEYGFPLKLKKQYDNFIGGEWVAPVKKEDYDNLTPVTGEVLCKVASSSTDDVDLALDAAHQAKDAWGK
MPVQQRANLLLKVADRMEQNLELLANAETWDNGKPIRETSGADVPLAIDHFRYFASCVRAQEGGISEIDSETVAYHFHEP
LGVVAQIIPWNFPLLMACWKMAPALAAGNCIVLKPAKLTPLSVLLLMELVQDILPAGVINVVNGAGGEIGEYLATSKRIA
KVAFTGSTEVGQRIAGYAAQNLIPATLELGGKSPNIFFADVMDKEDEFFDKALEGFALFAFNQGEVCTCPSRALVQESIY
ERFMERAIKRVEAIKTGNPLDMETQMGAQVSAGQMKTILDYIEIGKNEGAEVLTGGAKKKLEGSLNEGYYLQPTILLGKN
NMRVFQEEIFGPVLAVTTFKDMDEALQIANDTAYGLGAGVWSRDGNVAYHMGRNIQAGRVWTNCYHAYPAHAAFGGYKQS
GIGRETHKMMLDHYQQTKCLLVSYSSKPMGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-144 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-150 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-150 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-150 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-149 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_00235 YP_005399886.1 aldehyde dehydrogenase VFG0082 Protein 8e-145 64