Gene Information

Name : hslU (Q7S_21905)
Accession : YP_005404153.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Unknown
Product : ATP-dependent protease ATP-binding subunit HslU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4820014 - 4821348 bp
Length : 1335 bp
Strand : +
Note : COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit

DNA sequence :
ATGTCTGAGATGACCCCGCGCGAGATCGTCAGCGAGTTAGACAGTTACATCATTGGCCAGGATAAAGCGAAACGCGCCGT
GGCTATTGCTTTGCGTAACCGCTGGCGCCGGATGCAGCTTGATGAAGCGCTGCGCCACGAAGTCACCCCGAAAAATATTC
TGATGATCGGTCCGACCGGTGTCGGTAAAACCGAAATTGCCCGCCGTCTGGCGAAGCTGGCTAACGCGCCGTTCATCAAA
GTAGAAGCGACTAAATTCACGGAAGTCGGTTACGTCGGTAAAGAAGTGGATTCAATTATCCGCGACCTGACCGATTCCGC
CGTAAAAATGGTGCGCCTGCAATCTATTGAGAAAAACCGTTATCGTGCTGAAGAACTGGCCGAAGAACGTATTCTGGATG
TGCTGATCCCGCCAGCGAAAAACAACTGGGGACAACCTGACGAAGCGCAGGAACCTTCTGCTGCACGCCAGAACTTCCGC
AAAAAACTACGTGAAGGCCAGCTCGACGACAAAGAGATTGAAATCAGCCTGGCATCCGGCCCGATGGGCGTGGAAATCAT
GTCCCCTCCGGGTATGGAAGAAATGACAAATCAGTTGCAGTCGATGTTCCAGAGCATGGGTGCTCAGAAACAGAAACCGC
GCAAACTGAAAATCAAAGAAGCGCTGAAGCTGCTGATCGAAGAAGAAGCCGCGAAACTGGTGAACCCGGAAGATCTGAAA
GAACAGGCAATCGAGGCCGTTGAGCAACACGGCATCGTGTTTATCGATGAGATCGACAAAATCTGTAAACGTGGCGGCCA
GAGTTCAGGCCCGGACGTCTCCCGCGAAGGTGTTCAGCGTGACCTGCTGCCTCTGGTGGAAGGCTGTACGGTGTCTACCA
AGCACGGCATGGTGAAAACCGATCACATTCTGTTTATCGCTTCCGGCGCATTCCAGACGGCCAGCCCGTCAGACCTGATC
CCTGAGTTGCAGGGTCGTCTGCCTATTCGTGTGGAACTGCAGGCGCTGTCGACTGAAGACTTCGAACGCATACTGACCGA
GCCAAGTGCTTCGCTGACTCATCAGTACAAAGCATTGATGGCGACCGAAGGCGTAACCATTGATTTCACCGCTGACGGTA
TCCGCCGTATTGCGGAAGCCGCATGGCAGGTGAACGAAACCACCGAGAACATAGGTGCGCGTCGTCTGCATACCGTTCTG
GAGCGTCTGATGGAAGATATCTCTTACGATGCCAGCGAAAGCAACGGTATCTCCATAAACATTGATGCAGATTATGTTAG
AAGCCACCTTGACCAGCTGGTAGCTGATGAAGATCTGAGCCGTTTTATCTTATAA

Protein sequence :
MSEMTPREIVSELDSYIIGQDKAKRAVAIALRNRWRRMQLDEALRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIK
VEATKFTEVGYVGKEVDSIIRDLTDSAVKMVRLQSIEKNRYRAEELAEERILDVLIPPAKNNWGQPDEAQEPSAARQNFR
KKLREGQLDDKEIEISLASGPMGVEIMSPPGMEEMTNQLQSMFQSMGAQKQKPRKLKIKEALKLLIEEEAAKLVNPEDLK
EQAIEAVEQHGIVFIDEIDKICKRGGQSSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQTASPSDLI
PELQGRLPIRVELQALSTEDFERILTEPSASLTHQYKALMATEGVTIDFTADGIRRIAEAAWQVNETTENIGARRLHTVL
ERLMEDISYDASESNGISINIDADYVRSHLDQLVADEDLSRFIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hslU YP_003728753.1 heat shock protein HslU Not tested cag PAI Protein 8e-96 47