Gene Information

Name : Q7S_21870 (Q7S_21870)
Accession : YP_005404146.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Unknown
Product : O-succinylhomoserine (thiol)-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4812495 - 4813655 bp
Length : 1161 bp
Strand : -
Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases

DNA sequence :
ATGACGCACAAGCAAGCCACCATTGCCGTGGGCAGTGGCCTGAACAATGATCAGCAATATGGTTGTGTAGTTCCGCCAAT
CTACCTTTCCAGTACCTATAACTTTGAAGATTTCAACCAGCCAAGAGCCCATGACTATTCACGTCGCGGCAATCCGTCAC
GGGATGTTGTCCAGCGTGCGCTGGCTGATTTGGAAGGCGGCGCCGGTGCGGTTCTGACCAGCAGCGGTATGTCAGCCATT
CATCTGGTGTGTACGGTCTTTCTGAAACCTGGCGATTTACTGGTTGCGCCGCACGACTGCTACGGCGGCAGTTACCGTTT
GTTCGACAGCCTGAGCAAACGTGGCGCGTATCGCGTGCTGTTTGTGGATCAGGGTGATCCACAGGCGCTGGCCGATGCGC
TGAAAGAAAAGCCGAAGCTGGTGCTGATTGAAACGCCGAGCAATCCTTTGCTGCGTGTGGTGGATATTCAGGCGATTTGC
GACGCGTCCCGCGCCGCCGGTGCCCTGACAGTGGTGGACAACACCTTCCTGAGTCCGGCGTTGCAAAATCCATTGCAGCT
TGGTGCGGATTTAGTCGTCCATTCATGTACTAAATATCTGAACGGGCATTCTGATGTGGTCGCCGGTACGGTAATATCTA
AGACCGCAGAACATGCGACAGAACTCGCCTGGTGGGCGAACAACATTGGCGTTACCGCTGCGGCCTTTGACAGCTATCTG
TTATTGCGCGGTTTGCGCACGTTAACGGTTCGCGTGAAACAGCAACAGGAAAATGCACTGGCAATTGTTGCTTATTTACA
AAAACAATTGCAGGTCAAAAAGCTGTATCATCCGTCGCTGCCGGAAAACCAGGGACATGAAATTGCCTGCCGCCAGCAAC
GTGGCTTTGGTGCCATGATCAGTTTTGAATTTAACGGAGATGAAGCTCAGTTGCGCCATTTCCTGAAAGAATTGAAGTTA
TTTACCCTCGCAGAATCACTGGGAGGCGTCGAAAGCCTGATTTCTCATACCGCGACCATGACACATGCTGGCATGGCGCC
GGAAGCGCGCAAAGCCGCCGGGATTTCTGACAGCTTGCTCCGTATTTCTGTAGGTCTTGAAGACAGCGAAGATTTGATTG
CTGATCTGGAAAATGCATTCCAGTCAGTGGCAACGAGGTAA

Protein sequence :
MTHKQATIAVGSGLNNDQQYGCVVPPIYLSSTYNFEDFNQPRAHDYSRRGNPSRDVVQRALADLEGGAGAVLTSSGMSAI
HLVCTVFLKPGDLLVAPHDCYGGSYRLFDSLSKRGAYRVLFVDQGDPQALADALKEKPKLVLIETPSNPLLRVVDIQAIC
DASRAAGALTVVDNTFLSPALQNPLQLGADLVVHSCTKYLNGHSDVVAGTVISKTAEHATELAWWANNIGVTAAAFDSYL
LLRGLRTLTVRVKQQQENALAIVAYLQKQLQVKKLYHPSLPENQGHEIACRQQRGFGAMISFEFNGDEAQLRHFLKELKL
FTLAESLGGVESLISHTATMTHAGMAPEARKAAGISDSLLRISVGLEDSEDLIADLENAFQSVATR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-57 42
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-58 42