Gene Information

Name : Q7S_20965 (Q7S_20965)
Accession : YP_005403969.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4593182 - 4595146 bp
Length : 1965 bp
Strand : +
Note : COG0422 Thiamine biosynthesis protein ThiC

DNA sequence :
ATGTCGAGTACCCAAAAACCCGTTATTTCTGAAAAGAAACCGTCAAATCGCCGTGAACAACGCGCGCAGGCACAATCGTT
TATCGACAGCTTGCAGGGCGAAGCTTTCCCCAACTCCCGGCGTATTTATCTTGAAGCTGACCGCGAAGATATCCGCGTGC
CGATGCGTGAAATCCAGCTCAGCCCGACGCTGGTCGGCGGCGGCAAAGACAATCCGCAGTTCGAAGAAAACGAAGCAATT
CCTGTTTACGACACCGCCGGACCTTACGGTGATCCGGCGGCAGTTATCGACGTGCATACCGGTCTGGGAAAATTACGCGC
CCGCTGGATAAACGAGCGTGCGGACACGCAGGAACTTTCACAGGTCAGTTCCGGTTTTACTCAGCAGCGGCTGGCGGATG
ACGGGCTGGACCACCTCCGCTTCGAACACCTGCCGCGCCCGCGCAAAGCCATTGCGGGTAAAAATGTCACGCAACTGCAT
TACGCCCGCAAAGGCATCATCACACCTGAGATGGAATTTATCGCCATTCGCGAAAATATGGGGCGTGAACGGATCCGCGG
CGAGGTTCTGCGCCAGCAACATCCCGGCGAAAGCTTTGGCGCGCATCTGCCCGCCAGTATCACTGCAGAGTTTGTGCGAC
AGGAAGTGGCAGCCGGGCGCGCGATTATTCCCGCCAACATTAACCACCCTGAATCAGAGCCGATGATCATCGGGCGTAAT
TTCCTGGTGAAAGTGAACGCTAATATCGGCAACTCGGCGGTGACATCTTCCATCGAAGAAGAAGTGGAGAAACTGGTGTG
GTCGACACGCTGGGGCGCGGACACCGTAATGGATCTCTCCACCGGACGTTATATACATGAAACCCGTGAATGGATCCTGC
GTAACAGTCCGGTACCGATCGGCACCGTGCCGATTTATCAGGCCCTGGAAAAAGTGAACGGTGTGGCCGAAGATCTGAAC
TGGGAAATATTCCGCGATACATTGCTTGAACAGGCCGAGCAAGGCGTCGATTACTTCACCATTCACGCCGGTGTGTTGCT
GCGTTATGTGCCGATGACCGCCAAACGCCTGACCGGGATCGTGTCGCGCGGCGGTTCGATCATGGCGAAATGGTGTCTGT
CACATCATCGCGAAAGCTTCCTGTTTGAGCATTTCCGCGAGATCTGTGAAATCTGCGCCGCCTATGATGTCTCGCTTTCA
TTGGGCGACGGCCTGCGTCCGGGTTCGATTCAGGATGCCAATGACGAAGCACAATTCGCCGAATTACGCACGCTGGGCGA
ACTGACCAAAATTGCCTGGGAATACGATGTTCAGGTGATGATCGAAGGTCCGGGACATGTGCCGATGCAGATGATCCGCC
GCAACATGACCGAAGAACTCGAGCAGTGTCACGAAGCCCCGTTCTATACCCTTGGTCCGCTGACTACCGATATCGCGCCG
GGTTACGATCACTTTACGTCCGGTATTGGCGCCGCGATGATTGGCTGGTTTGGCTGCGCCATGCTCTGTTATGTCACGCC
GAAAGAGCATCTGGGCCTGCCGAACAAAGAAGACGTTAAGCAGGGTTTGATTACCTACAAAATCGCAGCACACGCTGCCG
ATTTAGCCAAAGGCCATCCGGGTGCCCAAATCCGCGATAACGCCATGTCAAAAGCGCGTTTCGAATTCCGCTGGGAAGAT
CAGTTTAATCTGGCTCTCGATCCGGCAACGGCACGCGCCTACCACGATGAAACGCTGCCGCAGGAATCCGGCAAAGTTGC
ACACTTCTGCTCGATGTGTGGCCCGAAATTCTGCTCGATGAAAATCACTCAGGAAGTTCGCGATTACGCCGCTGCGCTTG
AAGCCAAAGCCCAGCCAATAGAACTCGTTGAATCCGGTATGGCGCAGATGTCTGCCGAATTCCGTTCGCGCGGCGGTGAG
CTTTATCACCCGGCCGATAACCTCAGTTCGGAGAGCAGCAAATGA

Protein sequence :
MSSTQKPVISEKKPSNRREQRAQAQSFIDSLQGEAFPNSRRIYLEADREDIRVPMREIQLSPTLVGGGKDNPQFEENEAI
PVYDTAGPYGDPAAVIDVHTGLGKLRARWINERADTQELSQVSSGFTQQRLADDGLDHLRFEHLPRPRKAIAGKNVTQLH
YARKGIITPEMEFIAIRENMGRERIRGEVLRQQHPGESFGAHLPASITAEFVRQEVAAGRAIIPANINHPESEPMIIGRN
FLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGVAEDLN
WEIFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHRESFLFEHFREICEICAAYDVSLS
LGDGLRPGSIQDANDEAQFAELRTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEQCHEAPFYTLGPLTTDIAP
GYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWED
QFNLALDPATARAYHDETLPQESGKVAHFCSMCGPKFCSMKITQEVRDYAAALEAKAQPIELVESGMAQMSAEFRSRGGE
LYHPADNLSSESSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 72
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 72
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 70