Gene Information

Name : Q7S_20340 (Q7S_20340)
Accession : YP_005403844.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4447798 - 4449258 bp
Length : 1461 bp
Strand : -
Note : COG1012 NAD-dependent aldehyde dehydrogenases

DNA sequence :
ATGTCAGCCCAACCTCATAAACTCTCCACGCATCCATTATTTAAGACCGGCTATTTTGCCGGTGGTAAATGGCTTAAAGC
CAAAGAAACCTTTGATGTGCTGGATCCGGCAACCGGCGATGTGGTCGCCAAAGTCGCCAAAGCCGGTAAAGCAGAAACAG
AAGCCGCGGTGAAGGCAGCCAGTGACGCATTCCCCGAATGGCGCAAAACCACTGCGAAAGCGCGTTCTGAAATCTTGCAT
CGCTGGTATGAACTGATGCTGGAAAATAAACAGTTTCTGGGTGAGCTGATGGTTGCCGAGCAGGGCAAACCGCTGAAAGA
GGCTCTGGGCGAAGTCGATTACGCCGCCAGCTACCTGCAATGGTTCAGCGAAGAAGCCAAACGCGCTAACGGAGAAATCA
TTCCTCCGGCCAAATCCGGCTCACGCATTCTGGCGACCCGCGAACCGGTCGGCGTGGTGGCGGCCATCACGCCGTGGAAT
TTCCCGCTGGCGATGCTCACCCGTAAACTGGGTCCGGCGCTGGCGGCAGGCTGTACCGGTCTTATTAAACCGGCCAGTAA
CACGCCGCTGTCGGCGTTCGCCTTGTTGCAACTGGCGCAGGATGCCGGGGTTCCGGACGGTGTGATCAATGGCGTGGCCG
GTGACACCGGTGCCATCAGCGACGTGATTATGACCAGCAATGCGGTACGTAAAGTCTCCTTTACCGGCTCGACGGAAATC
GGCAAAACGCTGGTGCGTAACAGCGCCGACACCATGAAAAAGGTGTCGATGGAACTGGGTGGCAATGCGCCGTATATCGT
GTTTGACGATGCCGACATTGAGGCGGCGGTGAAGGGCGCGATCACTTGTAAATTCCGCAATACCGGCCAGGTCTGCGTGT
GCATCAATCGTATTTATGTGCAGGAGGGCGTGTACGAGGCGTTTACCTCGCGGCTGGTGGAAGAAGTACGCAAGCTGAAA
GTCGGCAACGGCATGGATGAAGGCGTCATTGTCGGGCCGCTGATTGATATCAAAGGACTGGAGAAAGTTGAAGAGCACGT
CAAGGACGCGCTGGAGAAAGGTGGACGCCTGATGGAGGGCGGACAGCGCCACAAACTCGGTGGCAACTTCTTCCAGCCGA
CGGTCATTATTGATGCCACTGATGACATGAAAGTGGCGCATGAAGAAACCTTCGGTCCGCTGGCGGCCTGTTTCCGTTTC
AAAACGGAAGAGGAAGTGATTAAACGCGCCAACGACACACCTTTCGGGCTGGCAGCGTATTTCTATAGCCAGAATCTTCA
ACGTATTTTCCGGGTCGCGGATGCTATTGAGAGCGGGATGATTGGTATTAATGAATGTGCGATTTCCAACGAAGCCGCGC
CATTTGGCGGCGTAAAAGAATCCGGCCTTGGACGTGAAGGTTCGGTGCTGGGGCTGGAAGAATATTTGCAGGTGAAAACG
CTGCATTTAGGGAATCTTTAA

Protein sequence :
MSAQPHKLSTHPLFKTGYFAGGKWLKAKETFDVLDPATGDVVAKVAKAGKAETEAAVKAASDAFPEWRKTTAKARSEILH
RWYELMLENKQFLGELMVAEQGKPLKEALGEVDYAASYLQWFSEEAKRANGEIIPPAKSGSRILATREPVGVVAAITPWN
FPLAMLTRKLGPALAAGCTGLIKPASNTPLSAFALLQLAQDAGVPDGVINGVAGDTGAISDVIMTSNAVRKVSFTGSTEI
GKTLVRNSADTMKKVSMELGGNAPYIVFDDADIEAAVKGAITCKFRNTGQVCVCINRIYVQEGVYEAFTSRLVEEVRKLK
VGNGMDEGVIVGPLIDIKGLEKVEEHVKDALEKGGRLMEGGQRHKLGGNFFQPTVIIDATDDMKVAHEETFGPLAACFRF
KTEEEVIKRANDTPFGLAAYFYSQNLQRIFRVADAIESGMIGINECAISNEAAPFGGVKESGLGREGSVLGLEEYLQVKT
LHLGNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 1e-127 58
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 5e-80 41