|
Name : Q7S_20215 (Q7S_20215) Accession : YP_005403819.1 Strain : Rahnella aquatilis HX2 Genome accession: NC_017047 Putative virulence/resistance : Virulence Product : D-arabinose 5-phosphate isomerase Function : - COG functional category : - COG ID : - EC number : - Position : 4427991 - 4428977 bp Length : 987 bp Strand : + Note : COG0794 Predicted sugar phosphate isomerase involved in capsule formation DNA sequence : ATGGCTAACGATACCTTCGCCCCCGGTTTTGATTTTCAGGCCGTCGGACATGATGTGCTGAAAACAGAACGTGAAGGACT TGAGCAGTTAGATCAATACATTAACGGTGATTTTACCCGCGCCTGCGAAAAAATCTTCGCCTGCAATGGCAAAGTCGTCG TCATGGGCATGGGCAAATCTGGTCATATCGGCCGTAAGATGGCCGCCACCTTTGCCAGTACGGGCACACCGGCATTCTTT GTGCATCCCGGCGAAGCCAGCCACGGTGATCTGGGCATGGTATCGAAGCAGGATGTCGTCATTCTGATTTCCAACTCCGG CGAAGCCCATGAAATTCTGGGGCTGATACCGGTACTCAAACGTCTGGGCATTACGCTTATCTGCATGACGTCTAACCCCG AAAGCACGATGGGGAAAGCGGCAGATGTTCACCTTTGTGTAAAAGTGCCCAAAGAAGCCTGCCCGCTGGGTCTGGCACCG ACCAGCAGCACCACGGCAGTGCTGGTGATGGGCGATGCACTGGCCGTCGCACTGCTTGAAGCACGCGGCTTCACACCGGA AGATTTCGCCCTGTCACATCCTGGCGGAGCACTGGGTCGCAAGCTGTTACTGCGCGTCAGCGATATCATGCACACCGGGG ATGAAATTCCGCACGTCAGCCGTGAAGCTTCGTTGCGGGATGCGTTGCTGGAAATCACCCGAAAAAATCTGGGCATGACG GTTATCTGCAACGATTTGATGAAAATCGAAGGGATCTTTACCGATGGGGATTTACGACGCATCTTTGATATGGGCGTCAA CATCAATACGGCATCGATTGCGGATGTGATGACGACAGGCGGTATCCGCGTGCGTCCTTCACTGCTGGCAGTTGATGCGC TGAATTTAATGCAGGACAAACACATCACTTGCGTGATGGTTGCTGATGGTGACCAGTTGCTGGGTGTGTTACATATGCAC GATATGCTGCGCGCTGGCGTAGTTTAA Protein sequence : MANDTFAPGFDFQAVGHDVLKTEREGLEQLDQYINGDFTRACEKIFACNGKVVVMGMGKSGHIGRKMAATFASTGTPAFF VHPGEASHGDLGMVSKQDVVILISNSGEAHEILGLIPVLKRLGITLICMTSNPESTMGKAADVHLCVKVPKEACPLGLAP TSSTTAVLVMGDALAVALLEARGFTPEDFALSHPGGALGRKLLLRVSDIMHTGDEIPHVSREASLRDALLEITRKNLGMT VICNDLMKIEGIFTDGDLRRIFDMGVNINTASIADVMTTGGIRVRPSLLAVDALNLMQDKHITCVMVADGDQLLGVLHMH DMLRAGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 2e-50 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-50 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 4e-50 | 42 |
