Gene Information

Name : deoA (Q7S_19460)
Accession : YP_005403668.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Unknown
Product : thymidine phosphorylase
Function : -
COG functional category : -
COG ID : -
EC number : 2.4.2.4
Position : 4258913 - 4260241 bp
Length : 1329 bp
Strand : -
Note : COG0213 Thymidine phosphorylase

DNA sequence :
TTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGACGGTCAGCCTTTAAGCGATGAAGAAATTCGTTTCTTTGTTAA
TGGTATTCGCGACAGTCAGGTTTCAGAAGGCCAGATTGCCGCGCTGGCAATGACTATCTATTTCAATGATATGACCATGA
ATGAGCGTGTGTCGCTGACCATGGCAATGCGCGACTCCGGTACCGTACTGGACTGGAAATCGCTCAACCTCAACGGCCCG
ATCGTTGATAAACATTCGACCGGCGGTGTGGGTGACGTGACGTCCCTGATGCTGGGGCCGATGGTAGCGGCATGCGGCGG
TTATGTGCCGATGATTTCCGGCCGCGGCCTCGGTCATACCGGCGGTACGCTGGATAAACTTGAAGCCATCCCGGGCTTCG
ATATTTTCCCGGATGACAGCCGTTTTCGCAGCATCATTCAGGATGTCGGCGTGGCAATTATCGGCCAGACCAGCTCGCTG
GCTCCGGCGGATAAGCGTTTCTATGCGACACGTGATATCACCGCAACTGTCGATTCTATCCCGCTGATCACTGCTTCGAT
TCTCGCCAAAAAACTGGCCGAAGGGCTGGATGCGTTAGTGATGGACGTCAAAGTCGGCTCCGGGGCCTTCATGCCGACTT
ACCAGCTATCCGAAGATCTGGCGCAGGCGATTGTCGATGTGGCCAATGGCGCAGGTTGTAAAACCACGGCGCTGCTGACC
GACATGAATCAGGTGCTGGCATCCAGCGCAGGGAATGCGGTGGAAGTGCGCGAAGCCGTGCGCTTCCTGACGGGTGAATA
CCGGAATCCGCGTCTGCTGGAAGTGACAATGGCGCTCTGTGTTGAAATGCTGCTGTCCGGCGGGCTGGCAAAAGATGACG
CCGACGCCCGCAGTCAGTTGCAGGCCGTGCTGGATAACGGCAAAGCCGCAGAAGTCTTTGGCCGCATGATTGCCGCCCAG
AAAGGTCCAACCGATTTCATCGAGAATTACGATCGTTATCTGCAACAGGCCACGCTGAGCAAACCGGTTTACGCCGAAGG
CAACGGGATTGTCAGCGCGATGGACACCCGTGCGCTGGGCATGGCCGTCGTTTCACTGGGTGGCGGACGTCGCCGCGCCA
GCGATGCTATCGACTACAGCGTCGGTCTGACCCATATGGCGCAGCTTGGCCAGCAAGTGGATACCCGTCAGCCACTGGCG
ATGATCCACGCGAACAGTGAAGCGGCCTGGCAGCAGGCGGCGCAGGAAGTGCGTGCGGCCATTGTCCTGAGCGACAAAGC
GCCGGAAAGCACGTCGGTGGTTTACCGCCGGATCGGTGGTAACGCTTGA

Protein sequence :
MFLAQEIIRKKRDGQPLSDEEIRFFVNGIRDSQVSEGQIAALAMTIYFNDMTMNERVSLTMAMRDSGTVLDWKSLNLNGP
IVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGTLDKLEAIPGFDIFPDDSRFRSIIQDVGVAIIGQTSSL
APADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYQLSEDLAQAIVDVANGAGCKTTALLT
DMNQVLASSAGNAVEVREAVRFLTGEYRNPRLLEVTMALCVEMLLSGGLAKDDADARSQLQAVLDNGKAAEVFGRMIAAQ
KGPTDFIENYDRYLQQATLSKPVYAEGNGIVSAMDTRALGMAVVSLGGGRRRASDAIDYSVGLTHMAQLGQQVDTRQPLA
MIHANSEAAWQQAAQEVRAAIVLSDKAPESTSVVYRRIGGNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 4e-70 42