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Name : Q7S_01940 (Q7S_01940) Accession : YP_005400220.1 Strain : Rahnella aquatilis HX2 Genome accession: NC_017047 Putative virulence/resistance : Virulence Product : Pili assembly chaperone, N-terminal protein Function : - COG functional category : - COG ID : - EC number : - Position : 419733 - 420470 bp Length : 738 bp Strand : + Note : COG3121 P pilus assembly protein, chaperone PapD DNA sequence : ATGAACAGGTATTTTTTGCGTTTTGGGGCAGCATTACTGCTGATGATTGGCATGACTTATCCGACTTTCGCCGCCGTCAA TCTGGACCGGACACGCATCATCTATAACGCCAGTGATAAATCCGTCAGCGTGATGCTGGAAAACCAGAGCAAAGATCTAC CGTATCTTGCGCAGGTCTGGCTGGAGAACGAGCAGGGCGAAAAAATCACCTCTCCGCTGGTGGCGTTGCCGCCGATGCAG CGCATTGATGCTGGCCAGAAAAGCCAGATCCGCATTTTGCAGTTACCCGAAACCGCCGGTCTGCCGAAAGATCGCGAATC GCTGTTTTACTTTAACGTGCGTGAAGTGCCGCCAAAAAGTGACATGGCGAACGTGATGCAGGTGGCGATCCAAAGCCGCG TGAAGCTGTTTTTCCGTCCGGTGGAGCTCAGGAAGCTGGTGAAAGGTCACTGGCAGGAACAGCTTCAGGTTGCCCGTCTC AGTGATGGGCTAAAACTGACCAATCCGACACCGTTTTATATCACTGTCGGCTATCTGGGCAAAGACAACAAAGGCAATAT CCCTGGTTTTGACAGCGTGATGCTCGCACCGTTCGCCAGCGAAAATCTCACCGGCAAGCAGTACGTTAGCCAGCAATATA GTCTGGGTTACATGGATGATTACGGCGGTTTGCAGGTGAACGAGTACAACTGCCAGACACAACAATGTCAGCGCATCAGC AAAGACGCAAAACGCTAA Protein sequence : MNRYFLRFGAALLLMIGMTYPTFAAVNLDRTRIIYNASDKSVSVMLENQSKDLPYLAQVWLENEQGEKITSPLVALPPMQ RIDAGQKSQIRILQLPETAGLPKDRESLFYFNVREVPPKSDMANVMQVAIQSRVKLFFRPVELRKLVKGHWQEQLQVARL SDGLKLTNPTPFYITVGYLGKDNKGNIPGFDSVMLAPFASENLTGKQYVSQQYSLGYMDDYGGLQVNEYNCQTQQCQRIS KDAKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 5e-51 | 46 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 1e-50 | 45 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 3e-50 | 45 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 3e-50 | 45 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 2e-50 | 45 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 2e-50 | 45 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 1e-50 | 45 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 4e-44 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Q7S_01940 | YP_005400220.1 | Pili assembly chaperone, N-terminal protein | VFG1547 | Protein | 6e-51 | 45 |
| Q7S_01940 | YP_005400220.1 | Pili assembly chaperone, N-terminal protein | VFG0896 | Protein | 1e-50 | 45 |
| Q7S_01940 | YP_005400220.1 | Pili assembly chaperone, N-terminal protein | VFG0885 | Protein | 2e-44 | 43 |
