Gene Information

Name : Q7S_18585 (Q7S_18585)
Accession : YP_005403495.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Unknown
Product : glycoside hydrolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4059417 - 4059926 bp
Length : 510 bp
Strand : +
Note : COG3772 Phage-related lysozyme (muraminidase)

DNA sequence :
ATGCAGCCATCAATCGTTAGGCGCTGCGCCGTCGCCGCCGTCCTGGCGATTGCCGCGCTGCTGCCGCAAACGCCCACGTT
GAAAACGTCCGCCGCCGGTCTGACACTGATTGCCGATTTTGAAGGCTGCCGCCTGTCCGCCTATCAGTGCAGCGCGGGCG
TCTGGACAAACGGCATCGGGCACACCGCAGGCGTGAAGCCGCAGACCCAAATCAGCGAACGTCAGGCCGCCGTGAATCTG
GTGGAAGACGTGATGTGGGTGGAGAAAGGCATTGCCCGCTGTATGCCGGTTGCCATGCCGCAGCCGGTGTATGACGCCGT
GGTGTCCTTTGCGTTTAACGTCGGCGTGACGGCGGCGTGTCAATCCACTCTGGCCTTTTTTATCAGCAATGGGAAATGGC
GGGACGCCTGCGAACAGTTACCGCGCTGGGTGTTTGTGAAGGGCGAACGCGTCACCGGCCTGGAACGCCGCCGCGCAAAT
GAGCTGGCTTACTGCCTGCGGGGAGTCTGA

Protein sequence :
MQPSIVRRCAVAAVLAIAALLPQTPTLKTSAAGLTLIADFEGCRLSAYQCSAGVWTNGIGHTAGVKPQTQISERQAAVNL
VEDVMWVEKGIARCMPVAMPQPVYDAVVSFAFNVGVTAACQSTLAFFISNGKWRDACEQLPRWVFVKGERVTGLERRRAN
ELAYCLRGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nucD2 NP_458702.1 putative lysozyme Not tested SPI-7 Protein 5e-40 59
nucD NP_807909.1 lysozyme Not tested SPI-7 Protein 5e-40 59