Gene Information

Name : Q7S_18555 (Q7S_18555)
Accession : YP_005403489.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Unknown
Product : capsid scaffolding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4055817 - 4056668 bp
Length : 852 bp
Strand : +
Note : -

DNA sequence :
ATGGCAACAAAAGCAAAGCGCTTTCGTATCTGCACCGAAGGGGCAACCACCGACGGGCGCGAAATCACCCGCGAGTGGAT
TGAACAGATGGCGGCGACCTATGACCCGAAGGTTTACGGCGCACGCATCAACATGGAGCACATCAAGGGCTATTTCCCTG
ACAGTGCGTTTCGTATGTACGGCGACGTCACCGGCGTTTACGCCGAAGAAGTGGCTGACGGTGCCCTAAAAGGCAAGCTG
GCACTGTATGCCGATATCGACCCGACCCCGGATTTAGTGTCGATGGTGAAAGCCCGCCAGAAGGTTTACACCTCCATCGA
AGTGAATCCCTCGTTTTCCGACACCGGCAAAGCCTACCTGATCGGCCTGGCCGTGACCGACAGCCCCGCCAGCCTCGGCA
CGGAGTACCTGCAATTCAGCGCGAAGGCACAGCAAAACCCGCTGGCGAGCCGCAAACAGGATGCCGGAAACCTCTTTACC
GCCGCCGAAGAAACGGCGTTCGAGTTTGTGGAAGAAGCACCGGCAGCCCCGTCGCTGTTCTCCCGTGTGAAACAACTGCT
TTCCAGCAAATCCGCCTCGGATGATGCCCGCTTTAAAGACGTTCATGACGCCGTTGAGGTGGTGGTGGAACACGTCGAAA
TCGGCCTGCAAGCCACTGATGAAAAGCTGTCCGCGCTGGAGATTTCCGTGACAGAACGTCTGAACGCGCTGGAACAAACC
GTGAAAGATGACCGCGAACAGTTCAGCGCGCTGAAAGGCAAACTGGAGAAGTCCGCGCCGCAGAGCTACACGCAGCGCCC
CGTTTCCAGCGGTGGCGGCAAGGGTGATGCAGCCCATTTCACCGACTGCTAA

Protein sequence :
MATKAKRFRICTEGATTDGREITREWIEQMAATYDPKVYGARINMEHIKGYFPDSAFRMYGDVTGVYAEEVADGALKGKL
ALYADIDPTPDLVSMVKARQKVYTSIEVNPSFSDTGKAYLIGLAVTDSPASLGTEYLQFSAKAQQNPLASRKQDAGNLFT
AAEETAFEFVEEAPAAPSLFSRVKQLLSSKSASDDARFKDVHDAVEVVVEHVEIGLQATDEKLSALEISVTERLNALEQT
VKDDREQFSALKGKLEKSAPQSYTQRPVSSGGGKGDAAHFTDC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4626 NP_458708.1 putative capsid protein Not tested SPI-7 Protein 3e-58 53
t4320 NP_807915.1 capsid protein Not tested SPI-7 Protein 3e-58 53
unnamed ABR13465.1 putative capsid scaffold Not tested PAGI-6 Protein 2e-45 46