Gene Information

Name : Q7S_18545 (Q7S_18545)
Accession : YP_005403487.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Unknown
Product : phage portal protein, PBSX family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4052873 - 4053904 bp
Length : 1032 bp
Strand : -
Note : COG5518 Bacteriophage capsid portal protein

DNA sequence : 
ATGAGTAAGCGCAAATTCCGCAAGGCGTCACAAAACACAGTCACCGCCACCACACAGCAGACCGGCGGCGCGGAGGCGTT
CAGCTTTGGTGACCCGACGCCGGTTTTAGACCGCCGTGAAATCCTGGATTATATCGAATGCACGGGGAACGGCCAGTGGT
ACGAGCCGCCGGTCAGCTTTGACGGACTGGCCCGCACCCTACGGGCAGCGGTGCATCACAGCTCATCACTGTATGTGAAA
CGCAATATTCTGGCCTCGACCTATGTCCCGCATCCGCTGTTGTCACAGCAGGAATTCAGCCGATTCGCTCTGGATTACCT
GGTATTCGGGAATGCTTTTTTAGAAGTGATCCGCAACCAACTCGGCGACGCCGTGGTGATGAAAACCGTGCCCGCCAAAT
ATGCGCGGCGCGGGGTTGAGTCGGATGTTTACTGGTTTGTGCAGCAATGGAAAGAGGCGCACCAGTTTGAAGTGGGTAGC
GTGTTTCATCTGATTGAACCGGATATCAATCAGGAGCTGTACGGCCTGCCGGAATATCTCAGCGCCCTGAATTCGGCCTG
GCTCAATGAAGCCGCCACGCTGTTCCGCCGCAAGTATTACCAGAACGGCGCGCACGCCGGATACATTCTGTACATGACCG
ACGCGGCGCAAAGCAGCTCCGACATCGACCAGATGCGTAAGGCGATGCGCGACACCAAAGGCCTGGGCAATTTCCGCAAC
CTGTTCATGTACGCGCCAAACGGCAAACCGGACGGGATCAAAATTCTGCCGTTAAGTGAAGTCGCCACCAAAGACGATTT
CTTCAATATCAAGAAAGCCAGCCAGAACGATTTGCTGTGCGCGCACCGCGTGCCACCGCAGATGATGGGGATTATTCCGG
AGAACAGCGGCGGGTTTGGTGATTCAGTGAAGGCGTCGCAGGTGTTTGTCAGGAATGAGCTGACGCCGTTACAAGAACGT
TTTAAAGAGTTAAATGCGTGGTTTGGGGAGGATGTGATCAGATTTACCTCTTACGAACTTACGCCGGAGTAA

Protein sequence : 
MSKRKFRKASQNTVTATTQQTGGAEAFSFGDPTPVLDRREILDYIECTGNGQWYEPPVSFDGLARTLRAAVHHSSSLYVK
RNILASTYVPHPLLSQQEFSRFALDYLVFGNAFLEVIRNQLGDAVVMKTVPAKYARRGVESDVYWFVQQWKEAHQFEVGS
VFHLIEPDINQELYGLPEYLSALNSAWLNEAATLFRRKYYQNGAHAGYILYMTDAAQSSSDIDQMRKAMRDTKGLGNFRN
LFMYAPNGKPDGIKILPLSEVATKDDFFNIKKASQNDLLCAHRVPPQMMGIIPENSGGFGDSVKASQVFVRNELTPLQER
FKELNAWFGEDVIRFTSYELTPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 8e-110 68
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 8e-110 68
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 1e-84 55