Gene Information

Name : Q7S_18010 (Q7S_18010)
Accession : YP_005403382.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Virulence
Product : ribokinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3932145 - 3933359 bp
Length : 1215 bp
Strand : -
Note : COG1349 Transcriptional regulators of sugar metabolism

DNA sequence :
ATGTTTCTTGAAGAACGTCGGCAGCAAATCCTGGAATATCTGGATAAAAACGAGCGGGTAAAAGTGGAGGTTTTGGCGTC
CCTGTTTGCGGTGACCAGAGAGACCATTCGCAGTGATCTGAATGCTCTGGCGGCTGAAAAATTGGTTCAGCGATGTCATG
GCGGTGCAATGGTGATACGGCGGAGTTTGCAGTCAAAGCTAATTGCTGACACCGGTGGCAACTTTGAAGTGTTGCTGCAA
CGGCTGCAGAGTCAGAAAAGAAAGCAGAGCGTACAACAGGGGAAAGGAAAGAACATGAAAGGTAAGGTTTGCATTCTGGG
TTCATTTAACGTCGATATCGTGGCGAAGGTTGAACGTTTTCCAAAAGGCGGAGAATCCCTGTTGGCGTTGGGCAGCACGC
TCGGCCCGGGCGGCAAAGGGGCGAATCAGGCCACGGCGGTCAGTCGTGCGGGTGCCAGAGTGCATTTCGTTTCCAAGGTG
GGTAAGGATCAGTTCAGCCAGTTTGCTTATGATCACCTGACCTCCTCGGAGATCCACTCCTTTACCCTTTATCAGTCGGA
CACTGAGCCGACCGGCAACGCCATCATTTATGTCTCGCAGGAAAACGGCGAGAACATGATTGCCATTTATTCCGGTGCCA
ATAAAACCATCAGCGAAGACGAAGTGGCAGCGATTGCCCCCGAACTGGAAGATTCGGACGTGCTGCTCGTACAGCTCGAA
AACAATTTTGCCGCTACCCTGAGCGCGATGAAATTGGCCAAAGCGCTGGGCGTGAAGGTGATTCTCAACCCGGCCCCTTT
CTCGAGCCATGCGCTTGAGTGTCTTGAATATGTTGACGTTATTACACCTAATGAAACTGAGGCATCGCAGCTTTCCGGCA
TTGACGTGAAGGATTTAGCCAGCGCCAAAGAGGCTGCACAGCGTATCGTCAGCCAGGGGGCGAGGCGGGTGATTATTACC
ATGGGATCGCGCGGCGCGTTGCTGTTTGACGGTAATCAGTTCCAGCACATTCCGGCCTTCCCGGCGCTGAGCGTTGATAC
CACCGGTGCAGGCGATGCTTTCAACGGCGCGCTGGCCTCAAGTATTGCCAATGGACAAAGTCTGGTTCAGGCGGCGACCT
ATGCCGCGGCGTTTGCCTCGCTGGCCGTCGAGCGTGAAGGTGCATCAAACATGCCTGATAAGGCTCAGGTTTCAGCACGT
CTGGCGCAGCGATAA

Protein sequence :
MFLEERRQQILEYLDKNERVKVEVLASLFAVTRETIRSDLNALAAEKLVQRCHGGAMVIRRSLQSKLIADTGGNFEVLLQ
RLQSQKRKQSVQQGKGKNMKGKVCILGSFNVDIVAKVERFPKGGESLLALGSTLGPGGKGANQATAVSRAGARVHFVSKV
GKDQFSQFAYDHLTSSEIHSFTLYQSDTEPTGNAIIYVSQENGENMIAIYSGANKTISEDEVAAIAPELEDSDVLLVQLE
NNFAATLSAMKLAKALGVKVILNPAPFSSHALECLEYVDVITPNETEASQLSGIDVKDLASAKEAAQRIVSQGARRVIIT
MGSRGALLFDGNQFQHIPAFPALSVDTTGAGDAFNGALASSIANGQSLVQAATYAAAFASLAVEREGASNMPDKAQVSAR
LAQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1076 YP_853096.1 carbohydrate kinase Not tested PAI IV APEC-O1 Protein 4e-67 48
rbsk YP_216390.1 DeoR family transcriptional regulator Not tested SPI-2 Protein 3e-66 47
ORF 408 CAB37417.1 - Not tested SPI-2 Protein 7e-66 46
orf408 NP_460347.1 regulatory protein Not tested SPI-2 Protein 1e-65 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_18010 YP_005403382.1 ribokinase VFG0483 Protein 4e-66 46