Gene Information

Name : Q7S_17560 (Q7S_17560)
Accession : YP_005403292.1
Strain : Rahnella aquatilis HX2
Genome accession: NC_017047
Putative virulence/resistance : Virulence
Product : PfkB domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3831585 - 3832517 bp
Length : 933 bp
Strand : -
Note : COG0524 Sugar kinases, ribokinase family

DNA sequence :
ATGAACAAAGGCAAGGTATGCGTATTTGGGTCTTTCAACCTCGATATCGTCGCAGGCATGGCGCGTTTCCCCAAACCGGG
GGAATCCCTGATTGCCCGCAACAGCATGATGGGCGCGGGCGGTAAGGGCGCCAATCAGGCGGTCGCCGCACTGCGTGCCG
GTGCGCGGGTGCATTACATCGGTAAAGTTGGTCGCGATGATTTCGGCATGTTTGCCCGCCGCCATCTCGACAGCGCCGGT
TTCGATGCCGTCACGTTGTTTTCCACCAGCGAATGCCCGACCGGCAACGCGCTGATTTATGTCGCCGGAGCCGATGCCGA
AAACATGATTGCCGTTGATCCGGGCGCCAACCTGACGGTCACCGACGAAGAAGTCGAACAATGCCGTCCGGCCGTCGCCG
CCGCTGATATCCTGCTGACGCAGCTCGAAAATAATCTGCCTGCGATTGAAAAACTGATCGGCATCGCGAAGGAAAATGAC
ACCTACATTATCCTCAACCCCGCGCCGTTCCAGCCGGTGTCCGACCATCTGCTGTCGCAGGTCGATTTACTGACGCCGAA
CGCCACGGAGTGCACGCTGCTGACCGGCATTGAAGTCCGCGATATTCCCTCTGCCCAACGCGCCGCCCACGCGCTGCACG
CCAAAGGAATACAGGCGCTGATCATCACACTGGGCACGCAGGGCGCATTGCTTTCAGTCAACGGCGAAACGCAGATTATC
CATGCCTGTCCGGCGATCCCGGTGGATACCACTGGTGCAGGTGACGCCTTTAACGGCGCGCTGGCCTCCCAACTCGCCGC
CGGCGCCACACTCCGTGAAGCCGCACAATTCGCATCTGCTTATGCTTCTGTATGTGTGGAACGCGCAGGCGCAGCCGCAT
CAATGCCGACGTATGAAGAAGCACATGAAAGAATGGGGGTTGTGGTGGTTTGA

Protein sequence :
MNKGKVCVFGSFNLDIVAGMARFPKPGESLIARNSMMGAGGKGANQAVAALRAGARVHYIGKVGRDDFGMFARRHLDSAG
FDAVTLFSTSECPTGNALIYVAGADAENMIAVDPGANLTVTDEEVEQCRPAVAAADILLTQLENNLPAIEKLIGIAKEND
TYIILNPAPFQPVSDHLLSQVDLLTPNATECTLLTGIEVRDIPSAQRAAHALHAKGIQALIITLGTQGALLSVNGETQII
HACPAIPVDTTGAGDAFNGALASQLAAGATLREAAQFASAYASVCVERAGAAASMPTYEEAHERMGVVVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rbsk YP_216390.1 DeoR family transcriptional regulator Not tested SPI-2 Protein 8e-52 46
ORF 408 CAB37417.1 - Not tested SPI-2 Protein 2e-51 45
orf408 NP_460347.1 regulatory protein Not tested SPI-2 Protein 2e-51 45
APECO1_1076 YP_853096.1 carbohydrate kinase Not tested PAI IV APEC-O1 Protein 6e-49 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Q7S_17560 YP_005403292.1 PfkB domain-containing protein VFG0483 Protein 1e-51 45